Ss1.1-Pig3-SRG8021F02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCAGATCAAGCATCCTTGCAGGAGTCTCTACAGGCTCTTCTCCCAAAAATGATCCCTGG AGTCGGGGTGCTCACCCAGGACACACTATGGTGCTTCAGCCAAGTGAAAGGCACTATCGA GATTGGAGCCACGGAAGCTGACATCATCTCTGCGGTAGAATTCAACCACACGGGAGAATT ACTAGCGACAGGGGACAAGGGGGGTCGGGTTGTAATATTTCAACGAGAGCAGGAGAGTAA AAATCAGGTCCATCGCAGGGGTGAATACAATGTTTACAGCACATTCCAGAGCCATGAACC CGAGTTCGATTACCTGAAGAGTTTAGAAATCGAAGAAAAAATCAATAAAATAAGATGGCT CCCTCAGCAGAATGCAGCCTACTTCTTTCTGTCTACTAATGATAAAACTGTGAAGCTGTG GAAAGTCAGCGAGCGTGATAAGAGGCCAGAAGGCTACAATCTGAAAGATGAGGAGGGCCG GCTGCGGGATCCTGCCACCATCACAACCTTGCGGGTGCCTGTCCTGAGACCCATGGACCT GATGGTGGAAGCGACCCCGCGAAGAGTATTTGCCAATGCACACACATACCACATCAACTC CATATCCGTCAACAGCGACTATGAAACCTACATGTCAGCTGACGACCTGAGGATTAACCT GTGGAACTTTGAGATAACCAATCAGAGTTTTAACATCGTGGACATCAAGCCCGCCAACAT GGAGGAGCTCACGGAGGTGATCACGACGGCCCCAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCAGATCAAGCATCCTTGCAGGAGTCTCTACAGGCTCTTCTCCCAAAAATGATCCCTGG AGTCGGGGTGCTCACCCAGGACACACTATGGTGCTTCAGCCAAGTGAAAGGCACTATCGA GATTGGAGCCACGGAAGCTGACATCATCTCTGCGGTAGAATTCAACCACACGGGAGAATT ACTAGCGACAGGGGACAAGGGGGGTCGGGTTGTAATATTTCAACGAGAGCAGGAGAGTAA AAATCAGGTCCATCGCAGGGGTGAATACAATGTTTACAGCACATTCCAGAGCCATGAACC CGAGTTCGATTACCTGAAGAGTTTAGAAATCGAAGAAAAAATCAATAAAATAAGATGGCT CCCTCAGCAGAATGCAGCCTACTTCTTTCTGTCTACTAATGATAAAACTGTGAAGCTGTG GAAAGTCAGCGAGCGTGATAAGAGGCCAGAAGGCTACAATCTGAAAGATGAGGAGGGCCG GCTGCGGGATCCTGCCACCATCACAACCTTGCGGGTGCCTGTCCTGAGACCCATGGACCT GATGGTGGAAGCGACCCCGCGAAGAGTATTTGCCAATGCACACACATACCACATCAACTC CATATCCGTCAACAGCGACTATGAAACCTACATGTCAGCTGACGACCTGAGGATTAACCT GTGGAACTTTGAGATAACCAATCAGAGTTTTAACATCGTGGACATCAAGCCCGCCAACAT GGAGGAGCTCACGGAGGTGATCACGACGGCCCCAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 554-697, - strand, RNAz p=0.98466 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 554-697, - strand, RNAz p=0.98466 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 234-404, gnl|bosTau2|chr7 (40420274-40420104) | |
| 234-404, gnl|canFam2|chr2 (43957215-43957435) | |
| 234-404, gnl|danRer3|chr12 (35605707-35605480) | |
| 234-404, gnl|dasNov1|scaffold_714 (50565-50775) | |
| 234-404, gnl|echTel1|scaffold_119193 (862-671) | |
| 234-404, gnl|fr1|chrUn (141400973-141400765) | |
| 234-404, gnl|galGal2|chr13 (16924448-16924636) | |
| 234-404, gnl|hg17|chr5 (146057729-146057941) | |
| 234-404, gnl|Hg17|chr5 (146057902-146057732) | |
| 234-404, gnl|loxAfr1|scaffold_81300 (5072-5261) | |
| 234-404, gnl|mm7|chr18 (43115808-43116019) | |
| 234-404, gnl|Mm7|chr18 (43115981-43115811) | |
| 234-404, gnl|monDom2|scaffold_6 (59584852-59584654) | |
| 234-404, gnl|oryCun1|scaffold_214519 (131094-130872) | |
| 234-404, gnl|panTro1|chr4 (152771333-152771545) | |
| 234-404, gnl|rheMac2|chr6 (143167189-143167401) | |
| 234-404, gnl|rn3|chr18 (36007727-36007938) | |
| 234-404, gnl|tetNig1|chr1 (2907248-2907065) | |
| 234-404, gnl|xenTro1|scaffold_493 (933384-933196) | |
| 514-697, gnl|bosTau2|chr7 (40368664-40368481) | |
| 514-697, gnl|canFam2|chr2 (43907055-43907280) | |
| 514-697, gnl|danRer3|chr21 (39017672-39017464) | |
| 514-697, gnl|dasNov1|scaffold_714 (11255-11480) | |
| 514-697, gnl|echTel1|scaffold_319617 (19061-19286) | |
| 514-697, gnl|fr1|chrUn (141403580-141403351) | |
| 514-697, gnl|galGal2|chr13 (16919414-16919610) | |
| 514-697, gnl|hg17|chr5 (146010277-146010502) | |
| 514-697, gnl|Hg17|chr5 (146010481-146010298) | |
| 514-697, gnl|loxAfr1|scaffold_16497 (41303-41528) | |
| 514-697, gnl|mm7|chr18 (43079356-43079581) | |
| 514-697, gnl|Mm7|chr18 (43079561-43079378) | |
| 514-697, gnl|monDom2|scaffold_6 (59648473-59648251) | |
| 514-697, gnl|oryCun1|scaffold_90844 (1190-1415) | |
| 514-697, gnl|panTro1|chr4 (152723908-152724133) | |
| 514-697, gnl|rheMac2|chr6 (143121208-143121433) | |
| 514-697, gnl|rn3|chr18 (35962702-35962927) | |
| 514-697, gnl|tetNig1|chr1 (2909939-2909750) | |
| 514-697, gnl|xenTro1|scaffold_493 (954842-954634) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 234-404, gnl|bosTau2|chr7 (40420274-40420104) | |
| 234-404, gnl|canFam2|chr2 (43957215-43957435) | |
| 234-404, gnl|danRer3|chr12 (35605707-35605480) | |
| 234-404, gnl|dasNov1|scaffold_714 (50565-50775) | |
| 234-404, gnl|echTel1|scaffold_119193 (862-671) | |
| 234-404, gnl|fr1|chrUn (141400973-141400765) | |
| 234-404, gnl|galGal2|chr13 (16924448-16924636) | |
| 234-404, gnl|hg17|chr5 (146057729-146057941) | |
| 234-404, gnl|Hg17|chr5 (146057902-146057732) | |
| 234-404, gnl|loxAfr1|scaffold_81300 (5072-5261) | |
| 234-404, gnl|mm7|chr18 (43115808-43116019) | |
| 234-404, gnl|Mm7|chr18 (43115981-43115811) | |
| 234-404, gnl|monDom2|scaffold_6 (59584852-59584654) | |
| 234-404, gnl|oryCun1|scaffold_214519 (131094-130872) | |
| 234-404, gnl|panTro1|chr4 (152771333-152771545) | |
| 234-404, gnl|rheMac2|chr6 (143167189-143167401) | |
| 234-404, gnl|rn3|chr18 (36007727-36007938) | |
| 234-404, gnl|tetNig1|chr1 (2907248-2907065) | |
| 234-404, gnl|xenTro1|scaffold_493 (933384-933196) | |
| 514-697, gnl|bosTau2|chr7 (40368664-40368481) | |
| 514-697, gnl|canFam2|chr2 (43907055-43907280) | |
| 514-697, gnl|danRer3|chr21 (39017672-39017464) | |
| 514-697, gnl|dasNov1|scaffold_714 (11255-11480) | |
| 514-697, gnl|echTel1|scaffold_319617 (19061-19286) | |
| 514-697, gnl|fr1|chrUn (141403580-141403351) | |
| 514-697, gnl|galGal2|chr13 (16919414-16919610) | |
| 514-697, gnl|hg17|chr5 (146010277-146010502) | |
| 514-697, gnl|Hg17|chr5 (146010481-146010298) | |
| 514-697, gnl|loxAfr1|scaffold_16497 (41303-41528) | |
| 514-697, gnl|mm7|chr18 (43079356-43079581) | |
| 514-697, gnl|Mm7|chr18 (43079561-43079378) | |
| 514-697, gnl|monDom2|scaffold_6 (59648473-59648251) | |
| 514-697, gnl|oryCun1|scaffold_90844 (1190-1415) | |
| 514-697, gnl|panTro1|chr4 (152723908-152724133) | |
| 514-697, gnl|rheMac2|chr6 (143121208-143121433) | |
| 514-697, gnl|rn3|chr18 (35962702-35962927) | |
| 514-697, gnl|tetNig1|chr1 (2909939-2909750) | |
| 514-697, gnl|xenTro1|scaffold_493 (954842-954634) |