Ss1.1-Pig3-SRG8021J05.3
               |  | CATAAGACATCCAGGGCAACCTAAAAAATTATTGCTGGTAGCAGCTGCAACAGAAAGAGA
ATTCACGAGGGCTGTAATAGTGAGACCTCATCAAGCTTCATCCAAGAAGTATGGGCTACT
TTTATGCCAGCTCCTTGCCTTGTGGCTGAAGAGGGCTCTGGCTCAGAGAGCTGATCTGGA
AAGGCAGCCCAGGGCTACATACCCTAGATGAGTAGAATAATCTTAGATACTTACACGCCA
TCCTATTCTCACCAGCATAGCTCTTAGACTGGAAAGGCCAAATTATTTAGCAAAATTCTT
AAAGCATTGTTCCCTTACCAATAAGCATCCAAGGTTTAACAGCCTGTTGATTAAATTGCA
TGTTGGAATCAATTGCCCTGTTAGATCAGAGCAGTTGTAAAAGTAGATCTGAATGAAAGT
TCTCAGTAGTGATAAGCGGTACTTTTGCTTCCCCTGAATTTATATTCTAAAATGAGTCAT
CAAAGAGGTTCTTTTACAGCTTACTCTGTCCATAAAAGAGCACTCAAGATGCTTGACAAC
AACAGCCACCACCACTAAAAACGTAAATGGAAGGGAAAAAAAAAGAGTCCACACTTTTCA
GTTTACTAAATTGCCTTAAACAAAACATAGTTCTAGGAGATACTGATATAATGCTCTAAA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CATAAGACATCCAGGGCAACCTAAAAAATTATTGCTGGTAGCAGCTGCAACAGAAAGAGA
ATTCACGAGGGCTGTAATAGTGAGACCTCATCAAGCTTCATCCAAGAAGTATGGGCTACT
TTTATGCCAGCTCCTTGCCTTGTGGCTGAAGAGGGCTCTGGCTCAGAGAGCTGATCTGGA
AAGGCAGCCCAGGGCTACATACCCTAGATGAGTAGAATAATCTTAGATACTTACACGCCA
TCCTATTCTCACCAGCATAGCTCTTAGACTGGAAAGGCCAAATTATTTAGCAAAATTCTT
AAAGCATTGTTCCCTTACCAATAAGCATCCAAGGTTTAACAGCCTGTTGATTAAATTGCA
TGTTGGAATCAATTGCCCTGTTAGATCAGAGCAGTTGTAAAAGTAGATCTGAATGAAAGT
TCTCAGTAGTGATAAGCGGTACTTTTGCTTCCCCTGAATTTATATTCTAAAATGAGTCAT
CAAAGAGGTTCTTTTACAGCTTACTCTGTCCATAAAAGAGCACTCAAGATGCTTGACAAC
AACAGCCACCACCACTAAAAACGTAAATGGAAGGGAAAAAAAAAGAGTCCACACTTTTCA
GTTTACTAAATTGCCTTAAACAAAACATAGTTCTAGGAGATACTGATATAATGCTCTAAA | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map