Non-Coding RNA Search

Ss1.1-Pig3-SRG8021K12.3

Sequence:


               
               CTTGACCCCACGAGGAAGGCACGCCCAGGTTCTCGAACTCGGTGTCTGTCTGGAGTGGAG
CTGCTTGAGTCCCATGGGCCGCTGACCCTGACGTCTGAGCTTCTCTTCCCACCCTCAGGG
CCTGGAGAGGATCTCATCCTACATGATGTCCAGCCGCTTCCTGCCACACCCCGTGTATAC
GAAGATGGCCATGTGGGGCAACAAGTAGTGCCCTGGAAGCATGATATGGAGTGAGGAGCA
TGCCCTGGAGGACAGCTGGCCCTCCCTGCAGCCCACGACCAGACGTCTTGCTTGTCCTCC
TTGTTCCCATCATGCCTCACGTGGCCCCTAAGCCTTTCCCAGGCCGCATTCACCAGGATC
TTGAGCGATATGCAGCATCCTGCCATTATGCCGTGAAGTCAGCGGCTGAAGGTATGCTTT
ATGATATGAGGCCAACCAGACCCGCATTCCTTTCTGTGCTTGCTCATGCTGTGAGCAGCC
TGCCCTGGAGAGATCAGGCATGACATGTGGAGCCTGGCCGTTGCCTGTGGGGCTCAGTCA
TGAGCTGCCCAGCCCTGCCATGAAGACCAGCCATGACCCGGCGTGTAGGCCCTGCTCCCC
CAGCGTGGTCCCCACCCAGCCCTGCATGATCAGCAGTAAAGCCTCACTCACATCCGCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGACCCCACGAGGAAGGCACGCCCAGGTTCTCGAACTCGGTGTCTGTCTGGAGTGGAG
CTGCTTGAGTCCCATGGGCCGCTGACCCTGACGTCTGAGCTTCTCTTCCCACCCTCAGGG
CCTGGAGAGGATCTCATCCTACATGATGTCCAGCCGCTTCCTGCCACACCCCGTGTATAC
GAAGATGGCCATGTGGGGCAACAAGTAGTGCCCTGGAAGCATGATATGGAGTGAGGAGCA
TGCCCTGGAGGACAGCTGGCCCTCCCTGCAGCCCACGACCAGACGTCTTGCTTGTCCTCC
TTGTTCCCATCATGCCTCACGTGGCCCCTAAGCCTTTCCCAGGCCGCATTCACCAGGATC
TTGAGCGATATGCAGCATCCTGCCATTATGCCGTGAAGTCAGCGGCTGAAGGTATGCTTT
ATGATATGAGGCCAACCAGACCCGCATTCCTTTCTGTGCTTGCTCATGCTGTGAGCAGCC
TGCCCTGGAGAGATCAGGCATGACATGTGGAGCCTGGCCGTTGCCTGTGGGGCTCAGTCA
TGAGCTGCCCAGCCCTGCCATGAAGACCAGCCATGACCCGGCGTGTAGGCCCTGCTCCCC
CAGCGTGGTCCCCACCCAGCCCTGCATGATCAGCAGTAAAGCCTCACTCACATCCGCAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               476-594, - strand, RNAz p=0.981417

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               476-594, - strand, RNAz p=0.981417

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-657, gnl|bosTau2|chr3 (25774074-25773415)
               

               
               1-657, gnl|Hg17|chr1 (109915710-109916369)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-657, gnl|bosTau2|chr3 (25774074-25773415)
               

               
               1-657, gnl|Hg17|chr1 (109915710-109916369)

	1-657, gnl\|bosTau2\|chr3 (25774074-25773415)
	1-657, gnl\|Hg17\|chr1 (109915710-109916369)