Ss1.1-Pig3-SRG8021L09.3
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CCAGTCTTTGGGAAACACCATCATACTGTAAGATTTACCTCCATATGCTATGGGAAGCAG
CTGTGGAAAAAGGCAATAAGACAAAAAAAAGAAAGAAAAGAAAAAAAAAAAAAAAAGAAA
TGAGATTTAAGTGGTAGTTTGAGGATTTAGTTTGCACTAAGCAGTCTTCAGAATGATGGG
CTTAGTTTTCATAGTCTTGTTTATTCCTGACTTTTTCACTGACTCTACCTTTTCTGCTAT
TACTTTGCTCATGGTTACGAACTTCGTTTAAGAAGCTGATCAAGTAGCACCCGAGCATTG
GATGTGTTGCTAATCTCATTTCTAGAACAAAGAGTGTGTGATCCAGGCCAAGACTGATGA
TTGAGCCGAGTTAACCGTCAAAAGACATTTTGGCCATCACTAGGACATTGGTACTGGCCT
GAATGCAGCCATAAGTGGTTTGCAAAATGTACTTATTTGACTCAAGTGCTCTTTTGTGGG
ATGAGTTATGAGTTTATAACATAATGGAATTTATATTTTGTGGTCATTTGTTAGGATCGT
CTTTGGCTATTTTTTTCATTTTAAAAAATTTATTGAAGTATAATTGATTTTCAATGTTGG
GTTATTTTCTGCTGTACAGCAAAGTGATTCAGTTATACATATACCTACATCCATTCTTTG
GACTCTTTTCCCATATAGGTTATCACAGAATATTGGGTAGAGTTCCCTGGGCTAGATACA
GCAGGTCTCTGTGGACCATCCATTCTACACTTTGGCTATTTATTTCTGATTGGTCAGCAC
GTCCCATTTCAGGATGATCTGCCAGTCGTCAGGACTACGGAGATCAAAAGACAAAGGGAA
TTAAGCCAAGGCACAGGGACACAATGAATTCTGACACTTTGCCCCTTGCTCCTTACACGT
GCCTATAGCAGGAATCTTACACTACTGATGGGAAGAACGGTTGCTTTCCAAAACACTTCT
TTATATCTTTTCTATTATCAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CCAGTCTTTGGGAAACACCATCATACTGTAAGATTTACCTCCATATGCTATGGGAAGCAG
CTGTGGAAAAAGGCAATAAGACAAAAAAAAGAAAGAAAAGAAAAAAAAAAAAAAAAGAAA
TGAGATTTAAGTGGTAGTTTGAGGATTTAGTTTGCACTAAGCAGTCTTCAGAATGATGGG
CTTAGTTTTCATAGTCTTGTTTATTCCTGACTTTTTCACTGACTCTACCTTTTCTGCTAT
TACTTTGCTCATGGTTACGAACTTCGTTTAAGAAGCTGATCAAGTAGCACCCGAGCATTG
GATGTGTTGCTAATCTCATTTCTAGAACAAAGAGTGTGTGATCCAGGCCAAGACTGATGA
TTGAGCCGAGTTAACCGTCAAAAGACATTTTGGCCATCACTAGGACATTGGTACTGGCCT
GAATGCAGCCATAAGTGGTTTGCAAAATGTACTTATTTGACTCAAGTGCTCTTTTGTGGG
ATGAGTTATGAGTTTATAACATAATGGAATTTATATTTTGTGGTCATTTGTTAGGATCGT
CTTTGGCTATTTTTTTCATTTTAAAAAATTTATTGAAGTATAATTGATTTTCAATGTTGG
GTTATTTTCTGCTGTACAGCAAAGTGATTCAGTTATACATATACCTACATCCATTCTTTG
GACTCTTTTCCCATATAGGTTATCACAGAATATTGGGTAGAGTTCCCTGGGCTAGATACA
GCAGGTCTCTGTGGACCATCCATTCTACACTTTGGCTATTTATTTCTGATTGGTCAGCAC
GTCCCATTTCAGGATGATCTGCCAGTCGTCAGGACTACGGAGATCAAAAGACAAAGGGAA
TTAAGCCAAGGCACAGGGACACAATGAATTCTGACACTTTGCCCCTTGCTCCTTACACGT
GCCTATAGCAGGAATCTTACACTACTGATGGGAAGAACGGTTGCTTTCCAAAACACTTCT
TTATATCTTTTCTATTATCAAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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119-389, gnl|bosTau2|chr3 (29542649-29542382) |
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119-389, gnl|Hg17|chr1 (107899588-107899878) |
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559-747, gnl|bosTau2|chr16 (40029676-40029861) |
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750-984, gnl|bosTau2|chr3 (29542251-29542015) |
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750-984, gnl|canFam2|chr6 (46992799-46992515) |
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750-984, gnl|dasNov1|scaffold_69575 (6667-6358) |
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750-984, gnl|hg17|chr1 (107899945-107900244) |
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750-984, gnl|Hg17|chr1 (107900019-107900248) |
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750-984, gnl|loxAfr1|scaffold_2786 (47257-47553) |
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750-984, gnl|mm7|chr3 (109443931-109443651) |
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750-984, gnl|Mm7|chr3 (109443869-109443566) |
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750-984, gnl|oryCun1|scaffold_205776 (5353-5672) |
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750-984, gnl|panTro1|chr1 (107007203-107007499) |
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750-984, gnl|rheMac2|chr1 (110551549-110551858) |
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750-984, gnl|rn3|chr2 (205231407-205231103) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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119-389, gnl|bosTau2|chr3 (29542649-29542382) |
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119-389, gnl|Hg17|chr1 (107899588-107899878) |
| |
|
559-747, gnl|bosTau2|chr16 (40029676-40029861) |
| |
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750-984, gnl|bosTau2|chr3 (29542251-29542015) |
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750-984, gnl|canFam2|chr6 (46992799-46992515) |
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750-984, gnl|dasNov1|scaffold_69575 (6667-6358) |
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750-984, gnl|hg17|chr1 (107899945-107900244) |
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750-984, gnl|Hg17|chr1 (107900019-107900248) |
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750-984, gnl|loxAfr1|scaffold_2786 (47257-47553) |
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750-984, gnl|mm7|chr3 (109443931-109443651) |
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750-984, gnl|Mm7|chr3 (109443869-109443566) |
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750-984, gnl|oryCun1|scaffold_205776 (5353-5672) |
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750-984, gnl|panTro1|chr1 (107007203-107007499) |
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750-984, gnl|rheMac2|chr1 (110551549-110551858) |
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750-984, gnl|rn3|chr2 (205231407-205231103) |
