Ss1.1-Pig3-SRG8022H20.3
|
GGAGAAGCTGCCTTCGCCTTCGTTGTGTTGAAAGATGATGTGGGTGATGTGGACGTGGTG
GTGAAGGAGCTCCGGTCAGTGGTGGCCGACAAGATCGCCAAGTACGCAGTGCCCGATCAG
GTCCTGGTAGTGAAGCGTCTTCCAAAAACTCGGTCTGGAAAAGTCATGCGGAGGCTCCTG
AGGAAGATTGTCATGGGCCGAGCTCATGACCTGGGGGACACCACCACCCTGGAGGACCCT
GGCGTCATCACGGAGATCCTGAGTGCCTACCATGAGTACAAAGACAAGCGGGGAGGTGCC
AAGTGATGGCTCTGCTGAGACCAGGCCCCTAATGCGTGCTCCTAGAGCACAGCTCCCGAG
TCGGCTTGTTCCTAGACACCCCAGCAGAACCCATGCTGCCCTCCTCGCGAAGCCTGAAGT
CCCCGCCTCCCCTCCTGGGGACCCACGACAGGTCCTCGCCCAGGGCGAGCTTCCTCCCGC
TTGTCCCGAATCTGGTTTCCTGGTGAAAAGTCCATCCCCCTGTCCCCTTGACAGCACAGG
AAGGTGGAGCCCCTGTGTCTGCTCAGGTGGACTGGGAGCAAACAGCAGTCATGTTTCCTC
CAGATGTTTCTAGAAACAAAAGGTGAAGATTTTATTTTTATACTTTTATATTTTAGAAGA
AACATGGTGCCCACACACGTGCAGTGTATGCTGTACTTGTACACACTCTTCTTAACAGTT
ATGAAAAGCTCCTTTTTTGCCTCCGCTCGTGGGGAAGTGTGGCGGGCTGGAGGGTGCAAT
TTGGGTTACTGTTTGGCTTGTTGGAAATTTAAGTTGGAAATGTTTGTGCCTCTGTCTTAA
CACAGCTATCTTGAAACCTGCAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAGAAGCTGCCTTCGCCTTCGTTGTGTTGAAAGATGATGTGGGTGATGTGGACGTGGTG
GTGAAGGAGCTCCGGTCAGTGGTGGCCGACAAGATCGCCAAGTACGCAGTGCCCGATCAG
GTCCTGGTAGTGAAGCGTCTTCCAAAAACTCGGTCTGGAAAAGTCATGCGGAGGCTCCTG
AGGAAGATTGTCATGGGCCGAGCTCATGACCTGGGGGACACCACCACCCTGGAGGACCCT
GGCGTCATCACGGAGATCCTGAGTGCCTACCATGAGTACAAAGACAAGCGGGGAGGTGCC
AAGTGATGGCTCTGCTGAGACCAGGCCCCTAATGCGTGCTCCTAGAGCACAGCTCCCGAG
TCGGCTTGTTCCTAGACACCCCAGCAGAACCCATGCTGCCCTCCTCGCGAAGCCTGAAGT
CCCCGCCTCCCCTCCTGGGGACCCACGACAGGTCCTCGCCCAGGGCGAGCTTCCTCCCGC
TTGTCCCGAATCTGGTTTCCTGGTGAAAAGTCCATCCCCCTGTCCCCTTGACAGCACAGG
AAGGTGGAGCCCCTGTGTCTGCTCAGGTGGACTGGGAGCAAACAGCAGTCATGTTTCCTC
CAGATGTTTCTAGAAACAAAAGGTGAAGATTTTATTTTTATACTTTTATATTTTAGAAGA
AACATGGTGCCCACACACGTGCAGTGTATGCTGTACTTGTACACACTCTTCTTAACAGTT
ATGAAAAGCTCCTTTTTTGCCTCCGCTCGTGGGGAAGTGTGGCGGGCTGGAGGGTGCAAT
TTGGGTTACTGTTTGGCTTGTTGGAAATTTAAGTTGGAAATGTTTGTGCCTCTGTCTTAA
CACAGCTATCTTGAAACCTGCAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
123-859, gnl|bosTau2|chr13 (28112292-28113028) |
|
123-859, gnl|canFam2|chr23 (4193355-4194007) |
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123-859, gnl|dasNov1|scaffold_109662 (2463-1793) |
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123-859, gnl|echTel1|scaffold_323443 (48295-47648) |
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123-859, gnl|hg17|chr20 (24935692-24936372) |
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123-859, gnl|Hg17|chr20 (24936581-24935755) |
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123-859, gnl|loxAfr1|scaffold_26594 (11031-11670) |
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123-859, gnl|mm7|chr2 (150359840-150360445) |
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123-859, gnl|Mm7|chr2 (150360653-150359907) |
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123-859, gnl|monDom2|scaffold_1 (62136671-62137363) |
|
123-859, gnl|oryCun1|scaffold_172951 (55089-54460) |
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123-859, gnl|panTro1|chr21 (25313265-25313940) |
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123-859, gnl|rheMac2|chr10 (58192092-58192771) |
|
123-859, gnl|rn3|chr3 (141165444-141166078) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
123-859, gnl|bosTau2|chr13 (28112292-28113028) |
|
123-859, gnl|canFam2|chr23 (4193355-4194007) |
|
123-859, gnl|dasNov1|scaffold_109662 (2463-1793) |
|
123-859, gnl|echTel1|scaffold_323443 (48295-47648) |
|
123-859, gnl|hg17|chr20 (24935692-24936372) |
|
123-859, gnl|Hg17|chr20 (24936581-24935755) |
|
123-859, gnl|loxAfr1|scaffold_26594 (11031-11670) |
|
123-859, gnl|mm7|chr2 (150359840-150360445) |
|
123-859, gnl|Mm7|chr2 (150360653-150359907) |
|
123-859, gnl|monDom2|scaffold_1 (62136671-62137363) |
|
123-859, gnl|oryCun1|scaffold_172951 (55089-54460) |
|
123-859, gnl|panTro1|chr21 (25313265-25313940) |
|
123-859, gnl|rheMac2|chr10 (58192092-58192771) |
|
123-859, gnl|rn3|chr3 (141165444-141166078) |
