Ss1.1-Pig3-SRG8022J15.3
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GAATTTCTGGGTTCCATTAGGGGCGAAAATTATGGGAAAGAATCCTTAGTATTGAAAAAG
AGAGGCCCATTGGACTAAAGAGAATTGGGTGGTATTTAATTGGAAACAAGTGAAATCCTC
CAAGATTGCTCATTGTTTTTTTGCCAAGAATTCCAAATTCTGAATGAATCTAGGGCGACT
AGAAGAGGATGGGGAATAAAATGATTGAAAAGTACTTTCCCATATATAATCTTGTGAGCT
AGCAACAGCCATCCTAAAGAGAAGGCAGAGCGGAGTGTGTAGCTTACTTTGCAGATGAGA
CATGAGAGAGAAACTGGAAAGGGAGGTGGAGGGTTTGGGTGTGATACTTTCAATCATGAC
AAGGTTGTAGGATTGGAGTGGGGCAGTGGGGCATTTGGGGGCAGAAGCCGGAGGAGAATC
TAACCAAAAACCTGCCCCCACAGGCAGAAGAGCGGCATAAGACAGGCCGGTTGGAGGAGG
CAGTGCACTGGGGGGCCCGGGCCCGGAGGTACATCCTGGCCAGCTTTGCTGTCTGGCTTG
CAGTCCTCGTTATGGGCCCCATGCTTCTATGGCTGCTCTCCTACGTCATCGCCCAAGCTG
AGTGACCCTGGGTGGCCTCTGCTGAGAGTCAGCTGAGACCTCCTGGTTCTTGCAGTGATA
GGGTCTGGTGCCAGCAGTGGTACTTCCTGACTGGAAGGATGGTGCTTCTCTCAAAGGTCT
TTGGAAGAGCTCTTAAGTCCTTTACAAATGGCAGCAGCTGAGACCGATGAGGGGAGGTCA
ACCTGCTCTGTTCTTTCAGTGCCCACCGTCCCCTATTCCCCCCAACCTACTCCTTTCCTA
GAGGCCTATAGGTGGTGTGGTTGAAGACCAGGCCTGATTTTATTAGTATTTGTTTTATAA
TAAAATCTTTTTTAGTGTGCAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GAATTTCTGGGTTCCATTAGGGGCGAAAATTATGGGAAAGAATCCTTAGTATTGAAAAAG
AGAGGCCCATTGGACTAAAGAGAATTGGGTGGTATTTAATTGGAAACAAGTGAAATCCTC
CAAGATTGCTCATTGTTTTTTTGCCAAGAATTCCAAATTCTGAATGAATCTAGGGCGACT
AGAAGAGGATGGGGAATAAAATGATTGAAAAGTACTTTCCCATATATAATCTTGTGAGCT
AGCAACAGCCATCCTAAAGAGAAGGCAGAGCGGAGTGTGTAGCTTACTTTGCAGATGAGA
CATGAGAGAGAAACTGGAAAGGGAGGTGGAGGGTTTGGGTGTGATACTTTCAATCATGAC
AAGGTTGTAGGATTGGAGTGGGGCAGTGGGGCATTTGGGGGCAGAAGCCGGAGGAGAATC
TAACCAAAAACCTGCCCCCACAGGCAGAAGAGCGGCATAAGACAGGCCGGTTGGAGGAGG
CAGTGCACTGGGGGGCCCGGGCCCGGAGGTACATCCTGGCCAGCTTTGCTGTCTGGCTTG
CAGTCCTCGTTATGGGCCCCATGCTTCTATGGCTGCTCTCCTACGTCATCGCCCAAGCTG
AGTGACCCTGGGTGGCCTCTGCTGAGAGTCAGCTGAGACCTCCTGGTTCTTGCAGTGATA
GGGTCTGGTGCCAGCAGTGGTACTTCCTGACTGGAAGGATGGTGCTTCTCTCAAAGGTCT
TTGGAAGAGCTCTTAAGTCCTTTACAAATGGCAGCAGCTGAGACCGATGAGGGGAGGTCA
ACCTGCTCTGTTCTTTCAGTGCCCACCGTCCCCTATTCCCCCCAACCTACTCCTTTCCTA
GAGGCCTATAGGTGGTGTGGTTGAAGACCAGGCCTGATTTTATTAGTATTTGTTTTATAA
TAAAATCTTTTTTAGTGTGCAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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2-794, gnl|bosTau2|chr25 (25693764-25692970) |
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2-794, gnl|Hg17|chr16 (30661870-30662972) |
| |
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805-917, gnl|bosTau2|chr25 (25692919-25692808) |
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805-917, gnl|canFam2|chr6 (20444559-20444208) |
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805-917, gnl|dasNov1|scaffold_13022 (43763-43437) |
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805-917, gnl|hg17|chr16 (30662798-30663155) |
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805-917, gnl|Hg17|chr16 (30662974-30663097) |
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805-917, gnl|loxAfr1|scaffold_40764 (34840-35202) |
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805-917, gnl|mm7|chr7 (123661536-123661881) |
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805-917, gnl|Mm7|chr7 (123661705-123661823) |
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805-917, gnl|monDom2|scaffold_478 (41606-41996) |
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805-917, gnl|oryCun1|scaffold_137208 (6464-6778) |
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805-917, gnl|rheMac2|chr20 (28818349-28818703) |
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805-917, gnl|rn3|chr1 (186999684-187000024) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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2-794, gnl|bosTau2|chr25 (25693764-25692970) |
|
2-794, gnl|Hg17|chr16 (30661870-30662972) |
| |
|
805-917, gnl|bosTau2|chr25 (25692919-25692808) |
|
805-917, gnl|canFam2|chr6 (20444559-20444208) |
|
805-917, gnl|dasNov1|scaffold_13022 (43763-43437) |
|
805-917, gnl|hg17|chr16 (30662798-30663155) |
|
805-917, gnl|Hg17|chr16 (30662974-30663097) |
|
805-917, gnl|loxAfr1|scaffold_40764 (34840-35202) |
|
805-917, gnl|mm7|chr7 (123661536-123661881) |
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805-917, gnl|Mm7|chr7 (123661705-123661823) |
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805-917, gnl|monDom2|scaffold_478 (41606-41996) |
|
805-917, gnl|oryCun1|scaffold_137208 (6464-6778) |
|
805-917, gnl|rheMac2|chr20 (28818349-28818703) |
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805-917, gnl|rn3|chr1 (186999684-187000024) |
