Ss1.1-Pig3-SRG8022P05.5
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TGTTTTGCTTTGTATAATCGCATCCTTCCTCTGGCTGGTTTAAAATGGGGCGGGGGTGGG
AGGATGGGGAAAGGTGTGCTGGAAGGGAATCCTCATTGGCTTTGATATGTCAGTGAGATT
CCCATAGCCTGGATTTCATAATTCAAGCGCATCCCCTATGATCATCCGGATAGACCGTGC
CCGGGGGCAGAGGATTTGCTTCTAAAAGTAGAGCAGGAGCCATCGTATACTCGGGGAGGT
TGGTGTATGAGCCAAGACCCATGAGTCGGGTCACCTTTGCGAAGGGTGGGAATTTCACAG
GTCTCCGAGTCTCTGATGGTTGTTATTTTATTTGTAAATTAAGAAGTAGGCGCCCCCAGC
TCTCGGGCTTACTTAGGGATTAGCATATGCAAAAGTCGACCCTCCGGTGGTGGTGCTTTC
TTATCCATCCCTCCCCAGATATCTGGTTTTTGATTGCAGAACCCACTACCTTTTTCTTTT
TAGCCATTTAAAATGATAGTTAATAATGTCACATTAGGACAGATCCCCTTCTTGCAAATG
AAGGCTGGGTTGGGACTTGTGCCATGTCACCCTCAAGTATGAAGTGTAAACTCTTTTCTT
GGGCCACCAAAGTAACTAAACAAGAAATGCGACATTCTCCCTTCAGAGTGCTTTGGAGTT
ATGACTGTGGCTATGTTTGGAAAATTAGCGTAGCTCGTAAAAGCCAAATGCAGAAAATGA
ATTGTTTAGCATTCTGTCTTACAGCTCCACACCCCCACCCCCCACTCCTTTAAGGAAAAG |
Blue-coloured subsequences are predicted RNA structures by RNAz
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TGTTTTGCTTTGTATAATCGCATCCTTCCTCTGGCTGGTTTAAAATGGGGCGGGGGTGGG
AGGATGGGGAAAGGTGTGCTGGAAGGGAATCCTCATTGGCTTTGATATGTCAGTGAGATT
CCCATAGCCTGGATTTCATAATTCAAGCGCATCCCCTATGATCATCCGGATAGACCGTGC
CCGGGGGCAGAGGATTTGCTTCTAAAAGTAGAGCAGGAGCCATCGTATACTCGGGGAGGT
TGGTGTATGAGCCAAGACCCATGAGTCGGGTCACCTTTGCGAAGGGTGGGAATTTCACAG
GTCTCCGAGTCTCTGATGGTTGTTATTTTATTTGTAAATTAAGAAGTAGGCGCCCCCAGC
TCTCGGGCTTACTTAGGGATTAGCATATGCAAAAGTCGACCCTCCGGTGGTGGTGCTTTC
TTATCCATCCCTCCCCAGATATCTGGTTTTTGATTGCAGAACCCACTACCTTTTTCTTTT
TAGCCATTTAAAATGATAGTTAATAATGTCACATTAGGACAGATCCCCTTCTTGCAAATG
AAGGCTGGGTTGGGACTTGTGCCATGTCACCCTCAAGTATGAAGTGTAAACTCTTTTCTT
GGGCCACCAAAGTAACTAAACAAGAAATGCGACATTCTCCCTTCAGAGTGCTTTGGAGTT
ATGACTGTGGCTATGTTTGGAAAATTAGCGTAGCTCGTAAAAGCCAAATGCAGAAAATGA
ATTGTTTAGCATTCTGTCTTACAGCTCCACACCCCCACCCCCCACTCCTTTAAGGAAAAG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1-763, gnl|bosTau2|chr6 (19550037-19550789) |
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1-763, gnl|canFam2|chr4 (41197050-41196401) |
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1-763, gnl|dasNov1|scaffold_4858 (13297-13940) |
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1-763, gnl|echTel1|scaffold_308604 (83199-83852) |
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1-763, gnl|hg17|chr5 (174086680-174087380) |
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1-763, gnl|Hg17|chr5 (174086849-174087639) |
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1-763, gnl|loxAfr1|scaffold_25138 (2920-3585) |
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1-763, gnl|mm7|chr13 (52506034-52505423) |
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1-763, gnl|Mm7|chr13 (52505876-52505202) |
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1-763, gnl|oryCun1|scaffold_211452 (3325-2677) |
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1-763, gnl|panTro1|chr4 (181483445-181484147) |
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1-763, gnl|rheMac2|chr6 (171147048-171147740) |
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1-763, gnl|rn3|chr17 (17245579-17246124) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-763, gnl|bosTau2|chr6 (19550037-19550789) |
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1-763, gnl|canFam2|chr4 (41197050-41196401) |
|
1-763, gnl|dasNov1|scaffold_4858 (13297-13940) |
|
1-763, gnl|echTel1|scaffold_308604 (83199-83852) |
|
1-763, gnl|hg17|chr5 (174086680-174087380) |
|
1-763, gnl|Hg17|chr5 (174086849-174087639) |
|
1-763, gnl|loxAfr1|scaffold_25138 (2920-3585) |
|
1-763, gnl|mm7|chr13 (52506034-52505423) |
|
1-763, gnl|Mm7|chr13 (52505876-52505202) |
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1-763, gnl|oryCun1|scaffold_211452 (3325-2677) |
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1-763, gnl|panTro1|chr4 (181483445-181484147) |
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1-763, gnl|rheMac2|chr6 (171147048-171147740) |
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1-763, gnl|rn3|chr17 (17245579-17246124) |