Ss1.1-Pig3-SRG8023C05.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGAGATGAACCCAGCTCCCTACACCATCATCACTTTCCCCTTCCTGTTTGCCGTGATGT TTGGAGACTGCGGTCATGGGACTGTGATGCTTCTGGCAGCCCTTTGGATGGTCCTCAATG AGAGACGCTTGCTCTCCCAAAAGACCAACAATGAGATCTGGAACACCTTCTTCCACGGCC GCGGCGTCATCCTCCTTATGGGCATCTTCTCCATCTACACGGGCTTGATCTACAATGACT GCTTCTCCAAGTCTTTCAACATCTTCGGCTCTTCCTGGAGCGTCCAGCCCATGTTCAGGA ACGGCACCTGGAATACTCAGGTAATAGGAACAAATCCATATTTACAGCTGGACCCAGCCA TTCCAGGAGTGTACTCTGGAAATCCATACCCTTTTGGGATTGATCCGATTTGGAACTTGG CTTCAAACAAGCTAACATTCTTGAACTCCTATAAGATGAAAATGTCGGTCATCCTGGGAA TCGTCCAGATGGTTTTTGGGGTCATTCTCAGCCTTTTCAACCACATATTCTTCAGAGACA CCCTCAGCATCATGCTGCAGTTCGTCCCCGAGGTGATTTTTATCCTGTGCCTGTTCGGGT ACCTGGTCTTCATGATCATCTTCAAATGGTGCTCCTTTGACGTCTCCGTGTCCCGGCGCG CCCCCAGCATCCTCATCCACTTCATTAACATGTTCCTGTTCAATTACAACGACCCTTCGA ACGCCCCAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGAGATGAACCCAGCTCCCTACACCATCATCACTTTCCCCTTCCTGTTTGCCGTGATGT TTGGAGACTGCGGTCATGGGACTGTGATGCTTCTGGCAGCCCTTTGGATGGTCCTCAATG AGAGACGCTTGCTCTCCCAAAAGACCAACAATGAGATCTGGAACACCTTCTTCCACGGCC GCGGCGTCATCCTCCTTATGGGCATCTTCTCCATCTACACGGGCTTGATCTACAATGACT GCTTCTCCAAGTCTTTCAACATCTTCGGCTCTTCCTGGAGCGTCCAGCCCATGTTCAGGA ACGGCACCTGGAATACTCAGGTAATAGGAACAAATCCATATTTACAGCTGGACCCAGCCA TTCCAGGAGTGTACTCTGGAAATCCATACCCTTTTGGGATTGATCCGATTTGGAACTTGG CTTCAAACAAGCTAACATTCTTGAACTCCTATAAGATGAAAATGTCGGTCATCCTGGGAA TCGTCCAGATGGTTTTTGGGGTCATTCTCAGCCTTTTCAACCACATATTCTTCAGAGACA CCCTCAGCATCATGCTGCAGTTCGTCCCCGAGGTGATTTTTATCCTGTGCCTGTTCGGGT ACCTGGTCTTCATGATCATCTTCAAATGGTGCTCCTTTGACGTCTCCGTGTCCCGGCGCG CCCCCAGCATCCTCATCCACTTCATTAACATGTTCCTGTTCAATTACAACGACCCTTCGA ACGCCCCAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 514-632, - strand, RNAz p=0.584754 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 514-632, - strand, RNAz p=0.584754 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 154-312, gnl|bosTau2|chr4 (60178005-60178163) | |
| 154-312, gnl|Hg17|chr7 (137887282-137887124) | |
| 154-312, gnl|Mm7|chr6 (38002934-38002776) | |
| 514-721, gnl|bosTau2|chr4 (60187787-60187994) | |
| 514-721, gnl|canFam2|chr16 (12882868-12882613) | |
| 514-721, gnl|danRer3|chr3 (6938523-6938282) | |
| 514-721, gnl|dasNov1|scaffold_36508 (7520-7768) | |
| 514-721, gnl|echTel1|scaffold_265582 (2382-2631) | |
| 514-721, gnl|fr1|chrUn (208872732-208872954) | |
| 514-721, gnl|galGal2|chr1 (53037877-53037654) | |
| 514-721, gnl|hg17|chr7 (137874868-137875123) | |
| 514-721, gnl|Hg17|chr7 (137875106-137874899) | |
| 514-721, gnl|loxAfr1|scaffold_45987 (7629-7382) | |
| 514-721, gnl|mm7|chr6 (37989642-37989883) | |
| 514-721, gnl|Mm7|chr6 (37989880-37989673) | |
| 514-721, gnl|monDom2|scaffold_22 (3807097-3806846) | |
| 514-721, gnl|oryCun1|scaffold_82676 (5349-5597) | |
| 514-721, gnl|panTro1|chr6 (140635247-140635502) | |
| 514-721, gnl|rheMac2|chr3 (176216244-176216499) | |
| 514-721, gnl|rn3|chr4 (65875530-65875784) | |
| 514-721, gnl|tetNig1|chr3 (12579543-12579765) | |
| 514-721, gnl|xenTro1|scaffold_332 (1199093-1199326) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 154-312, gnl|bosTau2|chr4 (60178005-60178163) | |
| 154-312, gnl|Hg17|chr7 (137887282-137887124) | |
| 154-312, gnl|Mm7|chr6 (38002934-38002776) | |
| 514-721, gnl|bosTau2|chr4 (60187787-60187994) | |
| 514-721, gnl|canFam2|chr16 (12882868-12882613) | |
| 514-721, gnl|danRer3|chr3 (6938523-6938282) | |
| 514-721, gnl|dasNov1|scaffold_36508 (7520-7768) | |
| 514-721, gnl|echTel1|scaffold_265582 (2382-2631) | |
| 514-721, gnl|fr1|chrUn (208872732-208872954) | |
| 514-721, gnl|galGal2|chr1 (53037877-53037654) | |
| 514-721, gnl|hg17|chr7 (137874868-137875123) | |
| 514-721, gnl|Hg17|chr7 (137875106-137874899) | |
| 514-721, gnl|loxAfr1|scaffold_45987 (7629-7382) | |
| 514-721, gnl|mm7|chr6 (37989642-37989883) | |
| 514-721, gnl|Mm7|chr6 (37989880-37989673) | |
| 514-721, gnl|monDom2|scaffold_22 (3807097-3806846) | |
| 514-721, gnl|oryCun1|scaffold_82676 (5349-5597) | |
| 514-721, gnl|panTro1|chr6 (140635247-140635502) | |
| 514-721, gnl|rheMac2|chr3 (176216244-176216499) | |
| 514-721, gnl|rn3|chr4 (65875530-65875784) | |
| 514-721, gnl|tetNig1|chr3 (12579543-12579765) | |
| 514-721, gnl|xenTro1|scaffold_332 (1199093-1199326) |