Ss1.1-Pig3-SRG8023C21.3
|
GTTGCTTCTACA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------CTCCTTTTTTCATTCAACCACTTA
GTAGTTCATTCAGGGATTCAAACATTCATTCTGCAAATATTGAGTACCTGTTATGTTCTA
ACAGGCCCTATTCTAGCTATATGTGCTGAATGAAACAAACAAAACCACTCTACCCCTTGG
AGCTTACAGTCCAAGCGGAAGGTGGGTAACAAACAAATGGAAAATTGTTCTGAGAGCTGT
GAAGAAAAGGAGCCAGGTGTAGCATGAGAATTGTTGGAGATTGTCTGAGTGGGGAACCTA
CACATATGGTGGTCAGAAAAGACCTCACTGAGGAGTTGCTCTTTAATCGGAGACTTGAAG
AATGAGAGGGGCTGGCTAGGAAGAACATGCGTGGCCCTTTTGGTAAACCACGTGAAGGCA
TGTATGGCTGGGGCAGAGGGAAGAAGTGGACAAGAGGCACCAAAGGAGGTTGGAGAGCTG
GGGAGAGGCCACATCTTTCCTGCTGCAATTCCCATGTCTCCTGGCTTTAGGCAGAGACCC
AGCTGCACAGACCTTCCTACTGCTTCCATGTGTTCTCATGCCCTGGGCCCAGTTTGCCCA
GACTGCCTTGGCTCCTATGGATTCTTCAGCATCTAGCTCAAAAGTCAGCTCTTCTGTGAA
GTTCTCCTTAACTCCCAAGCAAAACTTAGGCTAGTTGGGAGTTAAGGAGAACAGGCACTT
CCTTCTAGTGCCTCAAGCGAATTATACATGCTGCAATTACAGTACTAAAACACATATTCT
GTAATTATGTATTGAGGTTTATATCCTCCTGCTAAACTGTGATACCCCGGTGGGCAGGGA
CCTTTTCCTATCTATCTCATTATTCACAGTCGCTAGAAAAATAATTGTTAGCCAACAGAA
ACTTGAAAAAAATTATCAAATGAATTAACTGTGTTTTATTTAAAGATCTTCTTAATATTA
TTTTAATGTTTTGAAGAAATTACTTCTTATTTATTTATCCTCAGATGAATGAATATCATT
TTGTTCAATGCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTTGCTTCTACA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------CTCCTTTTTTCATTCAACCACTTA
GTAGTTCATTCAGGGATTCAAACATTCATTCTGCAAATATTGAGTACCTGTTATGTTCTA
ACAGGCCCTATTCTAGCTATATGTGCTGAATGAAACAAACAAAACCACTCTACCCCTTGG
AGCTTACAGTCCAAGCGGAAGGTGGGTAACAAACAAATGGAAAATTGTTCTGAGAGCTGT
GAAGAAAAGGAGCCAGGTGTAGCATGAGAATTGTTGGAGATTGTCTGAGTGGGGAACCTA
CACATATGGTGGTCAGAAAAGACCTCACTGAGGAGTTGCTCTTTAATCGGAGACTTGAAG
AATGAGAGGGGCTGGCTAGGAAGAACATGCGTGGCCCTTTTGGTAAACCACGTGAAGGCA
TGTATGGCTGGGGCAGAGGGAAGAAGTGGACAAGAGGCACCAAAGGAGGTTGGAGAGCTG
GGGAGAGGCCACATCTTTCCTGCTGCAATTCCCATGTCTCCTGGCTTTAGGCAGAGACCC
AGCTGCACAGACCTTCCTACTGCTTCCATGTGTTCTCATGCCCTGGGCCCAGTTTGCCCA
GACTGCCTTGGCTCCTATGGATTCTTCAGCATCTAGCTCAAAAGTCAGCTCTTCTGTGAA
GTTCTCCTTAACTCCCAAGCAAAACTTAGGCTAGTTGGGAGTTAAGGAGAACAGGCACTT
CCTTCTAGTGCCTCAAGCGAATTATACATGCTGCAATTACAGTACTAAAACACATATTCT
GTAATTATGTATTGAGGTTTATATCCTCCTGCTAAACTGTGATACCCCGGTGGGCAGGGA
CCTTTTCCTATCTATCTCATTATTCACAGTCGCTAGAAAAATAATTGTTAGCCAACAGAA
ACTTGAAAAAAATTATCAAATGAATTAACTGTGTTTTATTTAAAGATCTTCTTAATATTA
TTTTAATGTTTTGAAGAAATTACTTCTTATTTATTTATCCTCAGATGAATGAATATCATT
TTGTTCAATGCG
|
|
37-602, gnl|bosTau2|chr1 (71569247-71569802) |
|
37-602, gnl|Hg17|chr3 (156975679-156974906) |
| |
|
680-994, gnl|bosTau2|chr1 (71569997-71570306) |
|
680-994, gnl|canFam2|chr23 (52552540-52552911) |
|
680-994, gnl|hg17|chr3 (156974445-156974810) |
|
680-994, gnl|Hg17|chr3 (156974837-156974519) |
|
680-994, gnl|loxAfr1|scaffold_40284 (7106-6745) |
|
680-994, gnl|oryCun1|scaffold_167444 (7603-7955) |
|
680-994, gnl|panTro1|chr2 (160115962-160116326) |
|
680-994, gnl|rheMac2|chr2 (131892645-131892276) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
37-602, gnl|bosTau2|chr1 (71569247-71569802) |
|
37-602, gnl|Hg17|chr3 (156975679-156974906) |
| |
|
680-994, gnl|bosTau2|chr1 (71569997-71570306) |
|
680-994, gnl|canFam2|chr23 (52552540-52552911) |
|
680-994, gnl|hg17|chr3 (156974445-156974810) |
|
680-994, gnl|Hg17|chr3 (156974837-156974519) |
|
680-994, gnl|loxAfr1|scaffold_40284 (7106-6745) |
|
680-994, gnl|oryCun1|scaffold_167444 (7603-7955) |
|
680-994, gnl|panTro1|chr2 (160115962-160116326) |
|
680-994, gnl|rheMac2|chr2 (131892645-131892276) |
