Non-Coding RNA Search

Ss1.1-Pig3-SRG8023J01.5

Sequence:


               
               ACTGTGGTGACTCCAGAGAAGCCGATTCCTGTTTTTATTGAGAGATGTATTGAATACATT
GAAGCCACAGGATTGAGCACAGAAGGCATCTACCGGGTCAGTGGGAACAAGTCAGAAATG
GAGAGTCTGCAAAGACAGTTTGATCAAGACCACAACCTGGATTTGGCGGAGAAGGACTTC
ACAGTGAACACCGTGGCCGGGGCCATGAAGAGCTTTTTCTCAGAACTACCAGACCCCCTG
GTCCCATACAACATGCAGATGGATCTGGTGGAGGCACACAAAATCAACGACCGGGAGCAG
AAGCTACATGCCCTAAAGGAGGTACTCAAGAAATTTCCAAAGGAAAACCATGAAGTCTTC
AAATACGTCATCTCTCACCTGAACAAAGTCAGCCACAACAACAAGGTGAATCTCATGACC
AGTGAGAACCTGTCCATCTGCTTCTGGCCCACCTTGATGAGACCCGACTTCAGCACCATG
GACGCCCTCACGGCCACACGGACCTACCAGACAATCATTGAGCTCTTCATCCAGCAGTGC
CCCTTCTTCTTCCACAACCGGCCCATCAGCGAGCCTCCCGGCACCACGCCCAGCTCCCCC
TCTGCCCTGGCTTCCACTGTCCCCTTCCTCACCTCCACACCTGTTGCGAGCCAGCCCTCA
CCACCCCAGTCGCCACCACCCACCCCCCAGTCCCCGATGCAGCCACTGCTCCCCTCCCAG
CTTCAAGCTGAACACACGCTGTGAGCCCCCAGGGCCCAGGGCAAAAGGAGACAAGGTCTT
CTCTCTTTGACGGGGTGGTATTTGGCCTTGAACAAAACCAGGTCTACTAGGGCGNAGGTG
GAGAGGGTGTCCTCTCTCTCTTGTCCCCTTCTGAAAACCTCGGCAGTAGCACCAGCCAGC
ACTNCACCATCAGCTAGGCGGTCTGGTGCCCTGAGCCCAGCACTGCACACCTGGGGCTGG
CTGCAAGACCTCCCCTTTGATGTGGACCTTTCTGAGGACCGAACTGGCCAGGCAGCGGTG
CCTGCGGCCCTTCACTGCGCCCCAGGACCCCCCCACCCCCGATCTGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGTGGTGACTCCAGAGAAGCCGATTCCTGTTTTTATTGAGAGATGTATTGAATACATT
GAAGCCACAGGATTGAGCACAGAAGGCATCTACCGGGTCAGTGGGAACAAGTCAGAAATG
GAGAGTCTGCAAAGACAGTTTGATCAAGACCACAACCTGGATTTGGCGGAGAAGGACTTC
ACAGTGAACACCGTGGCCGGGGCCATGAAGAGCTTTTTCTCAGAACTACCAGACCCCCTG
GTCCCATACAACATGCAGATGGATCTGGTGGAGGCACACAAAATCAACGACCGGGAGCAG
AAGCTACATGCCCTAAAGGAGGTACTCAAGAAATTTCCAAAGGAAAACCATGAAGTCTTC
AAATACGTCATCTCTCACCTGAACAAAGTCAGCCACAACAACAAGGTGAATCTCATGACC
AGTGAGAACCTGTCCATCTGCTTCTGGCCCACCTTGATGAGACCCGACTTCAGCACCATG
GACGCCCTCACGGCCACACGGACCTACCAGACAATCATTGAGCTCTTCATCCAGCAGTGC
CCCTTCTTCTTCCACAACCGGCCCATCAGCGAGCCTCCCGGCACCACGCCCAGCTCCCCC
TCTGCCCTGGCTTCCACTGTCCCCTTCCTCACCTCCACACCTGTTGCGAGCCAGCCCTCA
CCACCCCAGTCGCCACCACCCACCCCCCAGTCCCCGATGCAGCCACTGCTCCCCTCCCAG
CTTCAAGCTGAACACACGCTGTGAGCCCCCAGGGCCCAGGGCAAAAGGAGACAAGGTCTT
CTCTCTTTGACGGGGTGGTATTTGGCCTTGAACAAAACCAGGTCTACTAGGGCGNAGGTG
GAGAGGGTGTCCTCTCTCTCTTGTCCCCTTCTGAAAACCTCGGCAGTAGCACCAGCCAGC
ACTNCACCATCAGCTAGGCGGTCTGGTGCCCTGAGCCCAGCACTGCACACCTGGGGCTGG
CTGCAAGACCTCCCCTTTGATGTGGACCTTTCTGAGGACCGAACTGGCCAGGCAGCGGTG
CCTGCGGCCCTTCACTGCGCCCCAGGACCCCCCCACCCCCGATCTGTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61825265|ref|XP_606689.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61825265|ref|XP_606689.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               147-280, gnl|bosTau2|chr18 (47014153-47014286)
               

               
               147-280, gnl|Hg17|chr19 (52184639-52184772)
               

               
               147-280, gnl|Mm7|chr7 (14273370-14273237)
               


               
               384-1057, gnl|bosTau2|chr18 (47021575-47022256)
               

               
               384-1057, gnl|Hg17|chr19 (52195425-52196074)
               

               
               384-1057, gnl|Mm7|chr7 (14260057-14259399)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               147-280, gnl|bosTau2|chr18 (47014153-47014286)
               

               
               147-280, gnl|Hg17|chr19 (52184639-52184772)
               

               
               147-280, gnl|Mm7|chr7 (14273370-14273237)
               


               
               384-1057, gnl|bosTau2|chr18 (47021575-47022256)
               

               
               384-1057, gnl|Hg17|chr19 (52195425-52196074)
               

               
               384-1057, gnl|Mm7|chr7 (14260057-14259399)

	147-280, gnl\|bosTau2\|chr18 (47014153-47014286)
	147-280, gnl\|Hg17\|chr19 (52184639-52184772)
	147-280, gnl\|Mm7\|chr7 (14273370-14273237)

	384-1057, gnl\|bosTau2\|chr18 (47021575-47022256)
	384-1057, gnl\|Hg17\|chr19 (52195425-52196074)
	384-1057, gnl\|Mm7\|chr7 (14260057-14259399)