Non-Coding RNA Search

Ss1.1-Pig3-SRG8023J16.5

Sequence:


               
               GGAAAAGGTATGTGAAATGCATTTAGAAAAAAAAGCAAGATGCAAAATAACTTGAGTAGT
ATACTAGTATATTTGTTTTAAAAAACATACTTTTTGTCTATTTATCCATATATTACAAAA
TTCTAGAGGATTATCTATCACACACTGCTTATGTATTTGTGCTGCTGTTCTTAACCAAGA
CTCCTCTATACTATCTCTGTAGTATTTGCATTTTATTTTATTTTTTATGTTAGAAAGAAA
AGTAAAAACCAAACTTTATTGTTGCTTTTTGCCATTTGGTAGCATTTTACACACAGGCTT
CAATCTTTGGAATACCCTGGATTCAGTAGAAAAAACTTTTATTTTTATTTATTTATTTAT
TTATTTATTTTTGGTCTTTTGTCCTTTTAGGGCTGCACCAGTGGCATGTGGAGCTTCCCA
GGCTAGGGGTCTAATGGGAGCTGTAGCCGCTGGCTTACGCCACAGCCACATGGGATCCGA
GCTGTGTCCTCGACTTACACCACAGCTCACGGCAATGCCGGATCCTTAACCCACTGAGCG
AGGCCAGGGATTGAACCCGCAACCTCATGGCTCTTAGTCAGATTCGTTAACCACTGCACC
ACGACAGGAACT------------TTTAAATGAAGTTTTGTACAATAGACACTTCTCAGC
AGTCAAAATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAAAGGTATGTGAAATGCATTTAGAAAAAAAAGCAAGATGCAAAATAACTTGAGTAGT
ATACTAGTATATTTGTTTTAAAAAACATACTTTTTGTCTATTTATCCATATATTACAAAA
TTCTAGAGGATTATCTATCACACACTGCTTATGTATTTGTGCTGCTGTTCTTAACCAAGA
CTCCTCTATACTATCTCTGTAGTATTTGCATTTTATTTTATTTTTTATGTTAGAAAGAAA
AGTAAAAACCAAACTTTATTGTTGCTTTTTGCCATTTGGTAGCATTTTACACACAGGCTT
CAATCTTTGGAATACCCTGGATTCAGTAGAAAAAACTTTTATTTTTATTTATTTATTTAT
TTATTTATTTTTGGTCTTTTGTCCTTTTAGGGCTGCACCAGTGGCATGTGGAGCTTCCCA
GGCTAGGGGTCTAATGGGAGCTGTAGCCGCTGGCTTACGCCACAGCCACATGGGATCCGA
GCTGTGTCCTCGACTTACACCACAGCTCACGGCAATGCCGGATCCTTAACCCACTGAGCG
AGGCCAGGGATTGAACCCGCAACCTCATGGCTCTTAGTCAGATTCGTTAACCACTGCACC
ACGACAGGAACT------------TTTAAATGAAGTTTTGTACAATAGACACTTCTCAGC
AGTCAAAATTTA

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

Help | Less info


               
               1-213, gnl|bosTau2|chr19 (36822297-36822089)
               

               
               1-213, gnl|canFam2|chr9 (23920628-23920392)
               

               
               1-213, gnl|hg17|chr17 (37733605-37733837)
               

               
               1-213, gnl|Hg17|chr17 (37733876-37733665)
               

               
               1-213, gnl|panTro1|chr19 (40937138-40937370)
               

               
               1-213, gnl|rheMac2|chr16 (52441464-52441696)
               


               
               226-341, gnl|bosTau2|chr17 (18473742-18473627)
               

               
               226-341, gnl|Hg17|chr3 (187117801-187117916)
               

               
               226-341, gnl|Mm7|chr16 (21897740-21897857)

Aligned organism(s): 9 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-213, gnl|bosTau2|chr19 (36822297-36822089)
               

               
               1-213, gnl|canFam2|chr9 (23920628-23920392)
               

               
               1-213, gnl|hg17|chr17 (37733605-37733837)
               

               
               1-213, gnl|Hg17|chr17 (37733876-37733665)
               

               
               1-213, gnl|panTro1|chr19 (40937138-40937370)
               

               
               1-213, gnl|rheMac2|chr16 (52441464-52441696)
               


               
               226-341, gnl|bosTau2|chr17 (18473742-18473627)
               

               
               226-341, gnl|Hg17|chr3 (187117801-187117916)
               

               
               226-341, gnl|Mm7|chr16 (21897740-21897857)

	1-213, gnl\|bosTau2\|chr19 (36822297-36822089)
	1-213, gnl\|canFam2\|chr9 (23920628-23920392)
	1-213, gnl\|hg17\|chr17 (37733605-37733837)
	1-213, gnl\|Hg17\|chr17 (37733876-37733665)
	1-213, gnl\|panTro1\|chr19 (40937138-40937370)
	1-213, gnl\|rheMac2\|chr16 (52441464-52441696)

	226-341, gnl\|bosTau2\|chr17 (18473742-18473627)
	226-341, gnl\|Hg17\|chr3 (187117801-187117916)
	226-341, gnl\|Mm7\|chr16 (21897740-21897857)