Ss1.1-Pig3-SRG8023O03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGAGTTGGAGAGACACATTCTCCCCAGTGGAAAGGGCACTTACCTGTCCTGGGTGGTG GTGGGAGTCCCCTCTCAGGACCGAGCCCCCTACTCCTGCCACGTGGAGCACCGTAGCCTG GCCCAGCCCCTCACATTGCTCTGGGATGAGAGGCAGACAGCAAGCGCTGAAGACAAAGTG GAGACCCCACGGCCCCAGTAGCCATTCTTTCTGCCTGACATGAGAGAGCAGAACATTAGA AATCAGCATCAATGACATCAACAGCATAAAGAACAGGTGATGGGTCTGGAAACAGAGGCT TGGATTCCAGGCCACGAGATGATTTCCCTCACCAAACACCTCATCCCCCAGCTTCCCCCT CCATTGTATAATCTGGAAAACCTAATTCACAGTCATCTCCTTGAGTAGCACAACAAAGAA GAGGTATTTTAAGCCCCAAAAAAAGAGATTCCACCACAGCTGGAGCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGAGTTGGAGAGACACATTCTCCCCAGTGGAAAGGGCACTTACCTGTCCTGGGTGGTG GTGGGAGTCCCCTCTCAGGACCGAGCCCCCTACTCCTGCCACGTGGAGCACCGTAGCCTG GCCCAGCCCCTCACATTGCTCTGGGATGAGAGGCAGACAGCAAGCGCTGAAGACAAAGTG GAGACCCCACGGCCCCAGTAGCCATTCTTTCTGCCTGACATGAGAGAGCAGAACATTAGA AATCAGCATCAATGACATCAACAGCATAAAGAACAGGTGATGGGTCTGGAAACAGAGGCT TGGATTCCAGGCCACGAGATGATTTCCCTCACCAAACACCTCATCCCCCAGCTTCCCCCT CCATTGTATAATCTGGAAAACCTAATTCACAGTCATCTCCTTGAGTAGCACAACAAAGAA GAGGTATTTTAAGCCCCAAAAAAAGAGATTCCACCACAGCTGGAGCTA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 34-140, + strand, RNAz p=0.971455 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 34-140, + strand, RNAz p=0.971455 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 4-155, gnl|bosTau2|chr25 (33087326-33087477) | |
| 4-155, gnl|canFam2|chr6 (12630242-12630025) | |
| 4-155, gnl|canFam2|chr6 (12629995-12630242) | |
| 4-155, gnl|dasNov1|scaffold_56582 (9534-9736) | |
| 4-155, gnl|dasNov1|scaffold_56582 (9764-9534) | |
| 4-155, gnl|echTel1|scaffold_312536 (3898-4106) | |
| 4-155, gnl|echTel1|scaffold_312536 (4136-3898) | |
| 4-155, gnl|hg17|chr7 (99229618-99229826) | |
| 4-155, gnl|hg17|chr7 (99209238-99209476) | |
| 4-155, gnl|Hg17|chr7 (99229663-99229834) | |
| 4-155, gnl|loxAfr1|scaffold_41808 (628-435) | |
| 4-155, gnl|loxAfr1|scaffold_41808 (386-628) | |
| 4-155, gnl|mm7|chr5 (136907644-136907852) | |
| 4-155, gnl|mm7|chr5 (136907882-136907644) | |
| 4-155, gnl|Mm7|chr5 (136907689-136907835) | |
| 4-155, gnl|monDom2|scaffold_8 (36737742-36737947) | |
| 4-155, gnl|monDom2|scaffold_8 (36737972-36737742) | |
| 4-155, gnl|oryCun1|scaffold_209171 (39659-39452) | |
| 4-155, gnl|oryCun1|scaffold_209171 (39419-39659) | |
| 4-155, gnl|panTro1|chr6 (101008713-101008921) | |
| 4-155, gnl|panTro1|chr6 (100987989-100988227) | |
| 4-155, gnl|rheMac2|chr3 (47257591-47257800) | |
| 4-155, gnl|rheMac2|chr3 (47234084-47234322) | |
| 4-155, gnl|rn3|chr12 (17487923-17488126) | |
| 4-155, gnl|rn3|chr12 (17488156-17487923) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-155, gnl|bosTau2|chr25 (33087326-33087477) | |
| 4-155, gnl|canFam2|chr6 (12630242-12630025) | |
| 4-155, gnl|canFam2|chr6 (12629995-12630242) | |
| 4-155, gnl|dasNov1|scaffold_56582 (9534-9736) | |
| 4-155, gnl|dasNov1|scaffold_56582 (9764-9534) | |
| 4-155, gnl|echTel1|scaffold_312536 (3898-4106) | |
| 4-155, gnl|echTel1|scaffold_312536 (4136-3898) | |
| 4-155, gnl|hg17|chr7 (99229618-99229826) | |
| 4-155, gnl|hg17|chr7 (99209238-99209476) | |
| 4-155, gnl|Hg17|chr7 (99229663-99229834) | |
| 4-155, gnl|loxAfr1|scaffold_41808 (628-435) | |
| 4-155, gnl|loxAfr1|scaffold_41808 (386-628) | |
| 4-155, gnl|mm7|chr5 (136907644-136907852) | |
| 4-155, gnl|mm7|chr5 (136907882-136907644) | |
| 4-155, gnl|Mm7|chr5 (136907689-136907835) | |
| 4-155, gnl|monDom2|scaffold_8 (36737742-36737947) | |
| 4-155, gnl|monDom2|scaffold_8 (36737972-36737742) | |
| 4-155, gnl|oryCun1|scaffold_209171 (39659-39452) | |
| 4-155, gnl|oryCun1|scaffold_209171 (39419-39659) | |
| 4-155, gnl|panTro1|chr6 (101008713-101008921) | |
| 4-155, gnl|panTro1|chr6 (100987989-100988227) | |
| 4-155, gnl|rheMac2|chr3 (47257591-47257800) | |
| 4-155, gnl|rheMac2|chr3 (47234084-47234322) | |
| 4-155, gnl|rn3|chr12 (17487923-17488126) | |
| 4-155, gnl|rn3|chr12 (17488156-17487923) |