Non-Coding RNA Search

Ss1.1-Pig3-SRG8024B03.5

Sequence:


               
               CACACTTGCAGTTCTATCTCAGTCATAAGACCCATGTTCCTGTGATGAAAGTGTAGGTAA
AGCCATGCCAAAAAGGCTCATAAATTTGCCTTGAAACTGCATTAGATAATGCTAAATATG
AGATTCATGACTAAAATGCTATTTCAGGAAATTGCCAGTCTGTCTCAGCATGGATGGCAT
CTCATCAAATTTGATGTAATCTGTTTGCTGACTGGAGAGACAGAAAATATTGCCGTTCTA
TCCCAATTTACACAAACATTAAATGGAATCACATGAAATTACTGTTTTTGTAAGTCAAAA
ATATTTGAATGCTGGCAATTCCATATGGTTTAAACTATTAAATGAATTCATTAGTAAATA
GACTCAAATCAGACAGCTAAATTGTTCCAGTACATTTGAAAAATGAAATGTATTAAGGAG
ATCCCTAGTAGTATTGCCTTCAAGTTATTAAGGTAAGTTAGACGGTGAAAAATAAGAAGT
TAACTTATTTCTTAAAAATAAGTTAAGAAATTAAAATTCTGTGTATTCTTGTCTTTGTTG
ATTTCTTTCAAGCTTCCTTAGACATAAATTTGTTTTATTCGCTACAGTGAATTTTTACAT
GTTAATTAAATGGGGTGTGACTCTTTTACATAAATGAATAACAATGACAAATCATGAATT
TCGTATGTGAACTTAAAATCTTACATTATGATTTGTGCTGTAAATGAGTTTATAGTATAT
ATTTTTTAGGGTTGGCCTAGGTGCAGCTGCAGCATAATAGAAATATTATTGGAACTAGAG
TAAAATCTTTCTTGGGTTGGAAGTCAGATCTTCCACTAGCTTTATTATACTCATCTGAAA
AAAAAAGGGGGAAATAATAATATCATGGAAAATTGTTGTAAGCCTCAAATAAGATGATGT
ATATTTAGGTATCTATAGATCATTAAACATTATAAGGTATGGTGTAGATGAAATAAGTAC
ATTCTCAGGGTCACCATCTATGCATGAACAGACTCACGTTTCTAGAATATTAACTGGATA
CATTTTTTAAAAATTCACAAACAGAATTAGTCTATGTATTGAAAAAGAAGGTTTACTGTT
TCTTAAAGAATAGATAGCCAGTAAGTATGAATGATTTGTGTGAAAAAGCAAAATCTATTA
ATAAAATAAATAACAATGTAAAAATAATTAAAGAATGACTTTTTTAAAAAGAATAGTTGC
TTTTAATTAATTATTTATTTTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACACTTGCAGTTCTATCTCAGTCATAAGACCCATGTTCCTGTGATGAAAGTGTAGGTAA
AGCCATGCCAAAAAGGCTCATAAATTTGCCTTGAAACTGCATTAGATAATGCTAAATATG
AGATTCATGACTAAAATGCTATTTCAGGAAATTGCCAGTCTGTCTCAGCATGGATGGCAT
CTCATCAAATTTGATGTAATCTGTTTGCTGACTGGAGAGACAGAAAATATTGCCGTTCTA
TCCCAATTTACACAAACATTAAATGGAATCACATGAAATTACTGTTTTTGTAAGTCAAAA
ATATTTGAATGCTGGCAATTCCATATGGTTTAAACTATTAAATGAATTCATTAGTAAATA
GACTCAAATCAGACAGCTAAATTGTTCCAGTACATTTGAAAAATGAAATGTATTAAGGAG
ATCCCTAGTAGTATTGCCTTCAAGTTATTAAGGTAAGTTAGACGGTGAAAAATAAGAAGT
TAACTTATTTCTTAAAAATAAGTTAAGAAATTAAAATTCTGTGTATTCTTGTCTTTGTTG
ATTTCTTTCAAGCTTCCTTAGACATAAATTTGTTTTATTCGCTACAGTGAATTTTTACAT
GTTAATTAAATGGGGTGTGACTCTTTTACATAAATGAATAACAATGACAAATCATGAATT
TCGTATGTGAACTTAAAATCTTACATTATGATTTGTGCTGTAAATGAGTTTATAGTATAT
ATTTTTTAGGGTTGGCCTAGGTGCAGCTGCAGCATAATAGAAATATTATTGGAACTAGAG
TAAAATCTTTCTTGGGTTGGAAGTCAGATCTTCCACTAGCTTTATTATACTCATCTGAAA
AAAAAAGGGGGAAATAATAATATCATGGAAAATTGTTGTAAGCCTCAAATAAGATGATGT
ATATTTAGGTATCTATAGATCATTAAACATTATAAGGTATGGTGTAGATGAAATAAGTAC
ATTCTCAGGGTCACCATCTATGCATGAACAGACTCACGTTTCTAGAATATTAACTGGATA
CATTTTTTAAAAATTCACAAACAGAATTAGTCTATGTATTGAAAAAGAAGGTTTACTGTT
TCTTAAAGAATAGATAGCCAGTAAGTATGAATGATTTGTGTGAAAAAGCAAAATCTATTA
ATAAAATAAATAACAATGTAAAAATAATTAAAGAATGACTTTTTTAAAAAGAATAGTTGC
TTTTAATTAATTATTTATTTTTGT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               22-487, gnl|bosTau2|chr15 (41258977-41259441)
               

               
               22-487, gnl|Hg17|chr11 (37169581-37170053)
               


               
               494-927, gnl|bosTau2|chr15 (41259424-41259842)
               

               
               494-927, gnl|Hg17|chr11 (37170034-37170462)
               


               
               940-1148, gnl|bosTau2|chr15 (41260345-41260553)
               

               
               940-1148, gnl|Hg17|chr11 (37170479-37170732)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-487, gnl|bosTau2|chr15 (41258977-41259441)
               

               
               22-487, gnl|Hg17|chr11 (37169581-37170053)
               


               
               494-927, gnl|bosTau2|chr15 (41259424-41259842)
               

               
               494-927, gnl|Hg17|chr11 (37170034-37170462)
               


               
               940-1148, gnl|bosTau2|chr15 (41260345-41260553)
               

               
               940-1148, gnl|Hg17|chr11 (37170479-37170732)

	22-487, gnl\|bosTau2\|chr15 (41258977-41259441)
	22-487, gnl\|Hg17\|chr11 (37169581-37170053)

	494-927, gnl\|bosTau2\|chr15 (41259424-41259842)
	494-927, gnl\|Hg17\|chr11 (37170034-37170462)

	940-1148, gnl\|bosTau2\|chr15 (41260345-41260553)
	940-1148, gnl\|Hg17\|chr11 (37170479-37170732)