Non-Coding RNA Search

Ss1.1-Pig3-SRG8024C07.5

Sequence:


               
               TTAGCTCTTCCTTTGGAAGCTAAGTTAGAACCCGAAGACCACAGAGAAGATACTTTTAAG
AGCTTTAGTGTTTACTATGCTACCATTTCAGCAGGTAGTGGCAAGCCTCATTTTAAGCAA
ACCGACTTAGTGCAGCCTCAGGCTGCCCCATTCATACACAGGCCCGGCTTAGAGCATTGT
GTAGACAGTCCGTACAGGAGCCTCCAGCACCAACACCTGCAGAGCCCTGCTGACTCACCT
GAGACCTCTGGGTGGACTTCTTAATAGCAGCCAGCAGAGCAGCCAGCAGAGCAGCCACGA
CGATGATTCCAGTAGGTTCCTGAGTCCTCGGGTGCGGGAAGAAAGCACTGCCAGTAACTC
AAACCGCAGCACGCCGGCCTGCTCCCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCC
GCAGAACCCGGACGGAGACACCATGGTGGAGAAGGGCTCAGATCACTCCTCGGACAAGTC
CCCGTCCACACCGGAGCAGGGTGTGCAGCGCAGCTGCTCCTCACAGTCTGGCCGTAGTGG
TGGCAAAAATTCCAAGAAAAGCCAGAGTTGGTATAATGTGTTAAGCCCCACTTACAAGCA
GAGAAATGAAGACTTCCGAAAGCTCTTTAAACAGCTTCCAGACTCAGAGCGCCTGATCGT
TGCTGACCGTTCGTTTGAAAGACATCTGCTCCATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAGCTCTTCCTTTGGAAGCTAAGTTAGAACCCGAAGACCACAGAGAAGATACTTTTAAG
AGCTTTAGTGTTTACTATGCTACCATTTCAGCAGGTAGTGGCAAGCCTCATTTTAAGCAA
ACCGACTTAGTGCAGCCTCAGGCTGCCCCATTCATACACAGGCCCGGCTTAGAGCATTGT
GTAGACAGTCCGTACAGGAGCCTCCAGCACCAACACCTGCAGAGCCCTGCTGACTCACCT
GAGACCTCTGGGTGGACTTCTTAATAGCAGCCAGCAGAGCAGCCAGCAGAGCAGCCACGA
CGATGATTCCAGTAGGTTCCTGAGTCCTCGGGTGCGGGAAGAAAGCACTGCCAGTAACTC
AAACCGCAGCACGCCGGCCTGCTCCCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCC
GCAGAACCCGGACGGAGACACCATGGTGGAGAAGGGCTCAGATCACTCCTCGGACAAGTC
CCCGTCCACACCGGAGCAGGGTGTGCAGCGCAGCTGCTCCTCACAGTCTGGCCGTAGTGG
TGGCAAAAATTCCAAGAAAAGCCAGAGTTGGTATAATGTGTTAAGCCCCACTTACAAGCA
GAGAAATGAAGACTTCCGAAAGCTCTTTAAACAGCTTCCAGACTCAGAGCGCCTGATCGT
TGCTGACCGTTCGTTTGAAAGACATCTGCTCCATGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12861530|dbj|BAB32220.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12861530|dbj|BAB32220.1|

Aligned organism(s): 16 entry(ies)

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Aligned organism(s): 16 entry(ies)

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               1-259, gnl|bosTau2|chr15 (18791327-18791571)
               

               
               1-259, gnl|canFam2|chr5 (13993879-13993246)
               

               
               1-259, gnl|dasNov1|scaffold_55694 (10166-10801)
               

               
               1-259, gnl|echTel1|scaffold_190360 (5052-4478)
               

               
               1-259, gnl|hg17|chr11 (122795700-122796321)
               

               
               1-259, gnl|Hg17|chr11 (122795978-122796253)
               

               
               1-259, gnl|loxAfr1|scaffold_7722 (64930-64292)
               

               
               1-259, gnl|mm7|chr9 (40395905-40395331)
               

               
               1-259, gnl|Mm7|chr9 (40395620-40395380)
               

               
               1-259, gnl|oryCun1|scaffold_198213 (180740-181360)
               

               
               1-259, gnl|panTro1|chr9 (124841784-124842405)
               

               
               1-259, gnl|rheMac2|chr14 (121774911-121775532)
               

               
               1-259, gnl|rn3|chr8 (43449506-43448939)
               


               
               344-566, gnl|bosTau2|chr15 (18981092-18981314)
               

               
               344-566, gnl|Hg17|chr11 (122953283-122953505)
               

               
               344-566, gnl|Mm7|chr9 (40263558-40263336)

Aligned organism(s): 16 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-259, gnl|bosTau2|chr15 (18791327-18791571)
               

               
               1-259, gnl|canFam2|chr5 (13993879-13993246)
               

               
               1-259, gnl|dasNov1|scaffold_55694 (10166-10801)
               

               
               1-259, gnl|echTel1|scaffold_190360 (5052-4478)
               

               
               1-259, gnl|hg17|chr11 (122795700-122796321)
               

               
               1-259, gnl|Hg17|chr11 (122795978-122796253)
               

               
               1-259, gnl|loxAfr1|scaffold_7722 (64930-64292)
               

               
               1-259, gnl|mm7|chr9 (40395905-40395331)
               

               
               1-259, gnl|Mm7|chr9 (40395620-40395380)
               

               
               1-259, gnl|oryCun1|scaffold_198213 (180740-181360)
               

               
               1-259, gnl|panTro1|chr9 (124841784-124842405)
               

               
               1-259, gnl|rheMac2|chr14 (121774911-121775532)
               

               
               1-259, gnl|rn3|chr8 (43449506-43448939)
               


               
               344-566, gnl|bosTau2|chr15 (18981092-18981314)
               

               
               344-566, gnl|Hg17|chr11 (122953283-122953505)
               

               
               344-566, gnl|Mm7|chr9 (40263558-40263336)

	1-259, gnl\|bosTau2\|chr15 (18791327-18791571)
	1-259, gnl\|canFam2\|chr5 (13993879-13993246)
	1-259, gnl\|dasNov1\|scaffold_55694 (10166-10801)
	1-259, gnl\|echTel1\|scaffold_190360 (5052-4478)
	1-259, gnl\|hg17\|chr11 (122795700-122796321)
	1-259, gnl\|Hg17\|chr11 (122795978-122796253)
	1-259, gnl\|loxAfr1\|scaffold_7722 (64930-64292)
	1-259, gnl\|mm7\|chr9 (40395905-40395331)
	1-259, gnl\|Mm7\|chr9 (40395620-40395380)
	1-259, gnl\|oryCun1\|scaffold_198213 (180740-181360)
	1-259, gnl\|panTro1\|chr9 (124841784-124842405)
	1-259, gnl\|rheMac2\|chr14 (121774911-121775532)
	1-259, gnl\|rn3\|chr8 (43449506-43448939)

	344-566, gnl\|bosTau2\|chr15 (18981092-18981314)
	344-566, gnl\|Hg17\|chr11 (122953283-122953505)
	344-566, gnl\|Mm7\|chr9 (40263558-40263336)