Ss1.1-Pig3-SRG8025G12.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGCTCGAGGCGGCTCGAGCAGATTTCGACCCTTCGATTCTGCCGCCCCCGGATCCCTG GATTGACTCCATCACCGAAGACCCCCTGGAGGCCGTGCAGAGGTCAGTGTGCCACCGGGA TGGCCACTGGTTTCTGAAGCTTCTCCAGGCGGAGCGAGACCGCATGGAAAGCTGGTGCCG GGGGGTGGAGATAGAATATCGCGAGAACAACCTGCCCGAATACATTATAGGGAAAATCCG AACTGCAGTGGGCAGTGCCCAACTTCTTATGGCCCAGAAATTCTACCAGTTCAGAGAACT GTGTGAAGAAAACCTGAATCCCAATGCGCATCCAAGGCCCACCTCCCAGGATTTGGCGGG GTTCTGGGACATGCTGCAGTTGTCCATAGAAAATATTAGTATGAAATTTGATGAACTTCA TCAGTTAAAGGCCAATAATTGGAAACAGATGGATCCTCTTGACAAGAAGGTAGAACAATG TAGATTTTGTATGGTTCATTTAAAAACCTGCACAAACACTGGACAGTCTAAATAGGCTTC TGCTTTCAGTCTTGCTGTTTACAATGTGAAATGGAGCTGATATCATATTAATTTCATTGT AATGACAATGTTTACATAGTAATCATTTGGGATATTATCTGTACTATGTTTCAGGCATAT TTTTAAAGAGAAACCTGTCTTTGTGAATTGGAAAATGGGAATGTGGCTTTTTTGTTGATT AAACTTTAAGTTAAACCATTTTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGCTCGAGGCGGCTCGAGCAGATTTCGACCCTTCGATTCTGCCGCCCCCGGATCCCTG GATTGACTCCATCACCGAAGACCCCCTGGAGGCCGTGCAGAGGTCAGTGTGCCACCGGGA TGGCCACTGGTTTCTGAAGCTTCTCCAGGCGGAGCGAGACCGCATGGAAAGCTGGTGCCG GGGGGTGGAGATAGAATATCGCGAGAACAACCTGCCCGAATACATTATAGGGAAAATCCG AACTGCAGTGGGCAGTGCCCAACTTCTTATGGCCCAGAAATTCTACCAGTTCAGAGAACT GTGTGAAGAAAACCTGAATCCCAATGCGCATCCAAGGCCCACCTCCCAGGATTTGGCGGG GTTCTGGGACATGCTGCAGTTGTCCATAGAAAATATTAGTATGAAATTTGATGAACTTCA TCAGTTAAAGGCCAATAATTGGAAACAGATGGATCCTCTTGACAAGAAGGTAGAACAATG TAGATTTTGTATGGTTCATTTAAAAACCTGCACAAACACTGGACAGTCTAAATAGGCTTC TGCTTTCAGTCTTGCTGTTTACAATGTGAAATGGAGCTGATATCATATTAATTTCATTGT AATGACAATGTTTACATAGTAATCATTTGGGATATTATCTGTACTATGTTTCAGGCATAT TTTTAAAGAGAAACCTGTCTTTGTGAATTGGAAAATGGGAATGTGGCTTTTTTGTTGATT AAACTTTAAGTTAAACCATTTTAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 78-197, + strand, RNAz p=0.864058 | |
| 348-467, + strand, RNAz p=0.5627 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 78-197, + strand, RNAz p=0.864058 | |
| 348-467, + strand, RNAz p=0.5627 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-219, gnl|bosTau2|chr24 (26557156-26557376) | |
| 1-219, gnl|canFam2|chr7 (73150129-73150293) | |
| 1-219, gnl|danRer3|chr2 (21388677-21388513) | |
| 1-219, gnl|dasNov1|scaffold_5640 (91584-91755) | |
| 1-219, gnl|echTel1|scaffold_310168 (72424-72595) | |
| 1-219, gnl|fr1|chrUn (151655692-151655849) | |
| 1-219, gnl|galGal2|chr2 (100001226-100001390) | |
| 1-219, gnl|hg17|chr18 (3524178-3524349) | |
| 1-219, gnl|Hg17|chr18 (3524417-3524197) | |
| 1-219, gnl|loxAfr1|scaffold_3988 (8130-7959) | |
| 1-219, gnl|mm7|chr17 (69066219-69066051) | |
| 1-219, gnl|Mm7|chr17 (69065981-69066201) | |
| 1-219, gnl|monDom2|scaffold_21 (30759924-30759753) | |
| 1-219, gnl|oryCun1|scaffold_212348 (60754-60586) | |
| 1-219, gnl|panTro1|chr17 (9226279-9226108) | |
| 1-219, gnl|rheMac2|chr18 (10643824-10643653) | |
| 1-219, gnl|rn3|chr9 (110196775-110196607) | |
| 1-219, gnl|tetNig1|chr6 (3879509-3879689) | |
| 1-219, gnl|xenTro1|scaffold_345 (1131041-1130878) | |
| 316-467, gnl|bosTau2|chr13 (44667490-44667641) | |
| 316-467, gnl|canFam2|chr24 (28280251-28280430) | |
| 316-467, gnl|danRer3|chrUn (67194367-67194228) | |
| 316-467, gnl|dasNov1|scaffold_48238 (6242-6064) | |
| 316-467, gnl|echTel1|scaffold_286911 (35226-35404) | |
| 316-467, gnl|fr1|chrUn (192002514-192002651) | |
| 316-467, gnl|galGal2|chr20 (363188-363347) | |
| 316-467, gnl|hg17|chr20 (34587651-34587829) | |
| 316-467, gnl|Hg17|chr20 (34587667-34587818) | |
| 316-467, gnl|loxAfr1|scaffold_36933 (33554-33376) | |
| 316-467, gnl|mm7|chr2 (156502646-156502824) | |
| 316-467, gnl|Mm7|chr2 (156502662-156502813) | |
| 316-467, gnl|monDom2|scaffold_6 (10465537-10465360) | |
| 316-467, gnl|oryCun1|scaffold_136717 (799-621) | |
| 316-467, gnl|panTro1|chr21 (36823859-36824037) | |
| 316-467, gnl|rheMac2|chr10 (27970067-27969889) | |
| 316-467, gnl|rn3|chr3 (147080622-147080800) | |
| 316-467, gnl|tetNig1|chrUn_random (43281131-43281281) | |
| 316-467, gnl|xenTro1|scaffold_637 (84340-84500) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-219, gnl|bosTau2|chr24 (26557156-26557376) | |
| 1-219, gnl|canFam2|chr7 (73150129-73150293) | |
| 1-219, gnl|danRer3|chr2 (21388677-21388513) | |
| 1-219, gnl|dasNov1|scaffold_5640 (91584-91755) | |
| 1-219, gnl|echTel1|scaffold_310168 (72424-72595) | |
| 1-219, gnl|fr1|chrUn (151655692-151655849) | |
| 1-219, gnl|galGal2|chr2 (100001226-100001390) | |
| 1-219, gnl|hg17|chr18 (3524178-3524349) | |
| 1-219, gnl|Hg17|chr18 (3524417-3524197) | |
| 1-219, gnl|loxAfr1|scaffold_3988 (8130-7959) | |
| 1-219, gnl|mm7|chr17 (69066219-69066051) | |
| 1-219, gnl|Mm7|chr17 (69065981-69066201) | |
| 1-219, gnl|monDom2|scaffold_21 (30759924-30759753) | |
| 1-219, gnl|oryCun1|scaffold_212348 (60754-60586) | |
| 1-219, gnl|panTro1|chr17 (9226279-9226108) | |
| 1-219, gnl|rheMac2|chr18 (10643824-10643653) | |
| 1-219, gnl|rn3|chr9 (110196775-110196607) | |
| 1-219, gnl|tetNig1|chr6 (3879509-3879689) | |
| 1-219, gnl|xenTro1|scaffold_345 (1131041-1130878) | |
| 316-467, gnl|bosTau2|chr13 (44667490-44667641) | |
| 316-467, gnl|canFam2|chr24 (28280251-28280430) | |
| 316-467, gnl|danRer3|chrUn (67194367-67194228) | |
| 316-467, gnl|dasNov1|scaffold_48238 (6242-6064) | |
| 316-467, gnl|echTel1|scaffold_286911 (35226-35404) | |
| 316-467, gnl|fr1|chrUn (192002514-192002651) | |
| 316-467, gnl|galGal2|chr20 (363188-363347) | |
| 316-467, gnl|hg17|chr20 (34587651-34587829) | |
| 316-467, gnl|Hg17|chr20 (34587667-34587818) | |
| 316-467, gnl|loxAfr1|scaffold_36933 (33554-33376) | |
| 316-467, gnl|mm7|chr2 (156502646-156502824) | |
| 316-467, gnl|Mm7|chr2 (156502662-156502813) | |
| 316-467, gnl|monDom2|scaffold_6 (10465537-10465360) | |
| 316-467, gnl|oryCun1|scaffold_136717 (799-621) | |
| 316-467, gnl|panTro1|chr21 (36823859-36824037) | |
| 316-467, gnl|rheMac2|chr10 (27970067-27969889) | |
| 316-467, gnl|rn3|chr3 (147080622-147080800) | |
| 316-467, gnl|tetNig1|chrUn_random (43281131-43281281) | |
| 316-467, gnl|xenTro1|scaffold_637 (84340-84500) |