Ss1.1-Pig3-SRG8025L07.5
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CAGCCATCAGCACTCAACCTGAGGCTGTGAAGCAGCAATTGGAGGAGACCAGTGAGATTC
GATCTGACGTAGAGCAGCTAGACCATGAGATTAAGGAGGCACAGGCCCTCTGCGATGAAC
TTTCAGTGCTCATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAAGCGTCTGGAGACAG
GGGCCCTGCCTCTCCAAGGTTTAGAAGACCTTGCAGCGGATCGCATGAACAGACTCCAGG
CAGCCCTTGCCAGCACCCAGCAGTTCCAGCAAATGTTTGATGAGCTGAGATCCTGGTTGG
ATGACAAACAAAGCCAGCAAGTGAAAAACTGCCCCATCTCTGCGAAATTGGAGCGGCTGC
AGTCTCAGCTACAGGAGAACGAAGAGTTTCAGAAGAGCCTTAACCAGCACAGTGGTTCCT
ATGAGGTGATTGTGGCAGAAGGAGAATCTCTGCTTCTGTCTGTTCCTCCTGGAGAGGAGA
AGAAGACTTTACAAAACCAGCTGGTTGAACTCAAAAGCCACTGGGAAGAGCTTAGTAAAA
AAACTGCAGACAGACAGTCCAGACTCAAGGACTGTCTGCAGAAAGCTCAGAAATATCAGT
GGCATGTGGAAGACCTGGTGCCATGGATAGAAGACTGTAAGGCCAAGATATCTGACCTGC
GGGTCACTCTGGACCCAGTGCAGCTGGAGTCCAGTCTCCTGAGGTCAAAGGCTATGCTGA
GTGAGGTGGAAAAGCGCCGCTCCCTGCTGGAAATACTGAACAGCGCTGCTGACATTCTCA
TCAACTCTTCGGAAACGGATGAAGATGACATCCGGGACGAGAAGGCTGGCATCAACCAGA
ACATGGATTCCATTACAGAAGAGCTACAGGCCAAAACAGGGTCCCTTGAAGAAATGACCC
AGAGGCTCAAGGAGTTCCAAGAAAGCTTTAAGAACATTGAAAAGAAAGTTGAAGGGGCCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
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CAGCCATCAGCACTCAACCTGAGGCTGTGAAGCAGCAATTGGAGGAGACCAGTGAGATTC
GATCTGACGTAGAGCAGCTAGACCATGAGATTAAGGAGGCACAGGCCCTCTGCGATGAAC
TTTCAGTGCTCATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAAGCGTCTGGAGACAG
GGGCCCTGCCTCTCCAAGGTTTAGAAGACCTTGCAGCGGATCGCATGAACAGACTCCAGG
CAGCCCTTGCCAGCACCCAGCAGTTCCAGCAAATGTTTGATGAGCTGAGATCCTGGTTGG
ATGACAAACAAAGCCAGCAAGTGAAAAACTGCCCCATCTCTGCGAAATTGGAGCGGCTGC
AGTCTCAGCTACAGGAGAACGAAGAGTTTCAGAAGAGCCTTAACCAGCACAGTGGTTCCT
ATGAGGTGATTGTGGCAGAAGGAGAATCTCTGCTTCTGTCTGTTCCTCCTGGAGAGGAGA
AGAAGACTTTACAAAACCAGCTGGTTGAACTCAAAAGCCACTGGGAAGAGCTTAGTAAAA
AAACTGCAGACAGACAGTCCAGACTCAAGGACTGTCTGCAGAAAGCTCAGAAATATCAGT
GGCATGTGGAAGACCTGGTGCCATGGATAGAAGACTGTAAGGCCAAGATATCTGACCTGC
GGGTCACTCTGGACCCAGTGCAGCTGGAGTCCAGTCTCCTGAGGTCAAAGGCTATGCTGA
GTGAGGTGGAAAAGCGCCGCTCCCTGCTGGAAATACTGAACAGCGCTGCTGACATTCTCA
TCAACTCTTCGGAAACGGATGAAGATGACATCCGGGACGAGAAGGCTGGCATCAACCAGA
ACATGGATTCCATTACAGAAGAGCTACAGGCCAAAACAGGGTCCCTTGAAGAAATGACCC
AGAGGCTCAAGGAGTTCCAAGAAAGCTTTAAGAACATTGAAAAGAAAGTTGAAGGGGCCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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3-216, gnl|bosTau2|chr3 (73222222-73222009) |
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3-216, gnl|canFam2|chr15 (6452065-6451794) |
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3-216, gnl|danRer3|chr19 (67799088-67798840) |
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3-216, gnl|dasNov1|scaffold_51946 (11567-11366) |
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3-216, gnl|echTel1|scaffold_312116 (4370-4138) |
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3-216, gnl|fr1|chrUn (83375185-83374940) |
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3-216, gnl|galGal2|chr23 (4822670-4822930) |
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3-216, gnl|hg17|chr1 (39520453-39520726) |
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3-216, gnl|Hg17|chr1 (39520481-39520694) |
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3-216, gnl|loxAfr1|scaffold_1908 (126886-127159) |
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3-216, gnl|mm7|chr4 (122879589-122879329) |
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3-216, gnl|Mm7|chr4 (122879559-122879346) |
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3-216, gnl|monDom2|scaffold_43 (9839818-9839543) |
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3-216, gnl|panTro1|chr1 (40400905-40401178) |
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3-216, gnl|rheMac2|chr1 (42256740-42257013) |
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3-216, gnl|rn3|chr5 (142748919-142748662) |
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3-216, gnl|tetNig1|chrUn_random (3320305-3320064) |
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3-216, gnl|xenTro1|scaffold_1043 (137343-137095) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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3-216, gnl|bosTau2|chr3 (73222222-73222009) |
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3-216, gnl|canFam2|chr15 (6452065-6451794) |
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3-216, gnl|danRer3|chr19 (67799088-67798840) |
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3-216, gnl|dasNov1|scaffold_51946 (11567-11366) |
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3-216, gnl|echTel1|scaffold_312116 (4370-4138) |
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3-216, gnl|fr1|chrUn (83375185-83374940) |
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3-216, gnl|galGal2|chr23 (4822670-4822930) |
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3-216, gnl|hg17|chr1 (39520453-39520726) |
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3-216, gnl|Hg17|chr1 (39520481-39520694) |
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3-216, gnl|loxAfr1|scaffold_1908 (126886-127159) |
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3-216, gnl|mm7|chr4 (122879589-122879329) |
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3-216, gnl|Mm7|chr4 (122879559-122879346) |
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3-216, gnl|monDom2|scaffold_43 (9839818-9839543) |
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3-216, gnl|panTro1|chr1 (40400905-40401178) |
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3-216, gnl|rheMac2|chr1 (42256740-42257013) |
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3-216, gnl|rn3|chr5 (142748919-142748662) |
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3-216, gnl|tetNig1|chrUn_random (3320305-3320064) |
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3-216, gnl|xenTro1|scaffold_1043 (137343-137095) |
