Non-Coding RNA Search

Ss1.1-Pig3-SRG8025N07.5

Sequence:


               
               TGAGTTTTAAATGTCAGTAACCAAAATTTTTTTTTTAATTTCCAGAAGTTTCACTTGGTT
CTTTTTCAAATCTATTTTATTGGGGGATGCTCTTCAATATTATAATCTCTTTAATATTGT
TGGATTATTTCTGCTGGAGTGGTGCAAATTCTTCAAACTATTTGGTCTGCTAACTCTCTC
TCATTGTGGTGTGTTTCCTTGAGTTATTTCTAATTGTTAACTATGAATGCATTCTTAGGC
AATCTAGTGTGCCCTGGATTGAGTATTAGTGTTTCTGCAGAGAGGCTTTGCATTTGCTTT
TGTTGAGGTCCTAAAATTAGCTTAGGGGCTATTTTTTTTTTTTTCCGCTTTGAGTTCCTG
CACCTGGAAGTTAGTACAACTCCTACTAACCCTTCTATATTAAAGTTTCAACCTACCCTC
AGGAGATTTATTCCCCCAATTAGAAACACAGACAGATGGCATACCTTCGTGCCAATTTTC
TAGCTTGGTGTCAGGAATTTTTCCTGGTCCTTGTTTTACTGATAGGACTTGGCTTTAAAC
AAGGTACTCTCCTTTAGTTCTTTGATGCAGAAAGGCTGACACTATGAAAAATATTCCCAC
AGGAGCATTAAAATCTTAGCACCCAAACCCTAGATCAGGATCTGATACCTTCTTTTGTTG
CCGTGGTGACAACTGAAGTTTACTTTTGGTTTGAGTTCCTTTTTTTTTATTTTAGGCACT
TGGGAGATTTCCCTTTATTTTTATTATTTGAGCTTGACTCTTTATGAAAAAGGGAATTTT
TGTCTTGTGGGGGAGTGTCTTCCTTGTCAGATTAGTCTGCTGTGTTGCTGAAAGCTCACT
TCTCATATCGTCATACTTTTGCTTGCTTCTGTATTCTTTTNCCCATGTCCAAATTTCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGTTTTAAATGTCAGTAACCAAAATTTTTTTTTTAATTTCCAGAAGTTTCACTTGGTT
CTTTTTCAAATCTATTTTATTGGGGGATGCTCTTCAATATTATAATCTCTTTAATATTGT
TGGATTATTTCTGCTGGAGTGGTGCAAATTCTTCAAACTATTTGGTCTGCTAACTCTCTC
TCATTGTGGTGTGTTTCCTTGAGTTATTTCTAATTGTTAACTATGAATGCATTCTTAGGC
AATCTAGTGTGCCCTGGATTGAGTATTAGTGTTTCTGCAGAGAGGCTTTGCATTTGCTTT
TGTTGAGGTCCTAAAATTAGCTTAGGGGCTATTTTTTTTTTTTTCCGCTTTGAGTTCCTG
CACCTGGAAGTTAGTACAACTCCTACTAACCCTTCTATATTAAAGTTTCAACCTACCCTC
AGGAGATTTATTCCCCCAATTAGAAACACAGACAGATGGCATACCTTCGTGCCAATTTTC
TAGCTTGGTGTCAGGAATTTTTCCTGGTCCTTGTTTTACTGATAGGACTTGGCTTTAAAC
AAGGTACTCTCCTTTAGTTCTTTGATGCAGAAAGGCTGACACTATGAAAAATATTCCCAC
AGGAGCATTAAAATCTTAGCACCCAAACCCTAGATCAGGATCTGATACCTTCTTTTGTTG
CCGTGGTGACAACTGAAGTTTACTTTTGGTTTGAGTTCCTTTTTTTTTATTTTAGGCACT
TGGGAGATTTCCCTTTATTTTTATTATTTGAGCTTGACTCTTTATGAAAAAGGGAATTTT
TGTCTTGTGGGGGAGTGTCTTCCTTGTCAGATTAGTCTGCTGTGTTGCTGAAAGCTCACT
TCTCATATCGTCATACTTTTGCTTGCTTCTGTATTCTTTTNCCCATGTCCAAATTTCTCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               632-751, - strand, RNAz p=0.798495

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               632-751, - strand, RNAz p=0.798495

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-900, gnl|bosTau2|chr16 (47549634-47548739)
               

               
               3-900, gnl|Hg17|chr1 (182452567-182453460)
               

               
               3-900, gnl|Mm7|chr1 (150902656-150901764)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-900, gnl|bosTau2|chr16 (47549634-47548739)
               

               
               3-900, gnl|Hg17|chr1 (182452567-182453460)
               

               
               3-900, gnl|Mm7|chr1 (150902656-150901764)

	3-900, gnl\|bosTau2\|chr16 (47549634-47548739)
	3-900, gnl\|Hg17\|chr1 (182452567-182453460)
	3-900, gnl\|Mm7\|chr1 (150902656-150901764)