Non-Coding RNA Search

Ss1.1-Pig3-SRG8026J24.5

Sequence:


               
               GATGTTTTATGACTGCTGAGAGGGACTGTTAACATTTTGTGTGAGAAATGAAAATGTAGA
AGAAACAAATTGGTGTTCAGTTTCAGATTAATCATGTATTCTGAGTGCCCTTGTTGAACT
TTTCAAGCCTCCTTTTATTTACTGTCTTTAAAAAAAAAACCCAACTCTGCATAATTTGTT
GTCTAATGTCTTACGGTCTTCATAGCAGAGTACATTTCCCTTTAACTAAACCTAAATCAT
AGCACTATAGTGTTCCTTTTGTTATTTCCCAAGGGATTCTATAGCACTGTTGTTCATGCT
TTAAGGGAGAAAAGAACCTGTTTGGGAGACACTCTCCTTTGAGAATTCTAAAATGGCAAA
TTGTTATGTAGTACTGATTTTTTTCCACCCTATCGTATACAATGAAAATATGTGGGTGTG
TGCACGCGTTTATACGGTAGTACCTTATCATAGTCTGGTTTGCCCAGATACTCCTAATTA
GAGTACCTGTTCATTCATCTGCATGGGTTATGGGGAGGCCTGGTTAATAATTGTGCGTGT
GGTGGGGATAATGATATGGAGGGAGATAGATATACTCAAGCCTTATGATTAGTCACCAGG
AGTCTTGATTCTCTTCTGCATTTTAGTCTTAAATAACTTTCCTAGGGGTCACCTGTGTAC
TCTGGAAGATGAGAGGTGGGGTTTGTTTTTTTTTTTTTTTTGACATCTTTATCTGTGAAA
GTTGTGAAAACAATGTGTGGATATGAAATACTATTAATTATTTTTATTATTTATTATTTA
CTCATGCAGTGTTAAAGCCCATTTGCTTGGGTCAGGCATGCAATGTGAATGCTGCCGAAA
TTAACACTTCTCCTGTAGTTCTGAAGTGTGGGACTTTAAAGGTTCTTAGACATATTGATG
CATATTTCATCTTTGAACCATATTTGTTGCTATTAATGAGATCATTATCTGAAACTTTCA
GACTTTGCTGTTCAGTTCACATGGCTAGTGATGTTAAATAAAGGCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGTTTTATGACTGCTGAGAGGGACTGTTAACATTTTGTGTGAGAAATGAAAATGTAGA
AGAAACAAATTGGTGTTCAGTTTCAGATTAATCATGTATTCTGAGTGCCCTTGTTGAACT
TTTCAAGCCTCCTTTTATTTACTGTCTTTAAAAAAAAAACCCAACTCTGCATAATTTGTT
GTCTAATGTCTTACGGTCTTCATAGCAGAGTACATTTCCCTTTAACTAAACCTAAATCAT
AGCACTATAGTGTTCCTTTTGTTATTTCCCAAGGGATTCTATAGCACTGTTGTTCATGCT
TTAAGGGAGAAAAGAACCTGTTTGGGAGACACTCTCCTTTGAGAATTCTAAAATGGCAAA
TTGTTATGTAGTACTGATTTTTTTCCACCCTATCGTATACAATGAAAATATGTGGGTGTG
TGCACGCGTTTATACGGTAGTACCTTATCATAGTCTGGTTTGCCCAGATACTCCTAATTA
GAGTACCTGTTCATTCATCTGCATGGGTTATGGGGAGGCCTGGTTAATAATTGTGCGTGT
GGTGGGGATAATGATATGGAGGGAGATAGATATACTCAAGCCTTATGATTAGTCACCAGG
AGTCTTGATTCTCTTCTGCATTTTAGTCTTAAATAACTTTCCTAGGGGTCACCTGTGTAC
TCTGGAAGATGAGAGGTGGGGTTTGTTTTTTTTTTTTTTTTGACATCTTTATCTGTGAAA
GTTGTGAAAACAATGTGTGGATATGAAATACTATTAATTATTTTTATTATTTATTATTTA
CTCATGCAGTGTTAAAGCCCATTTGCTTGGGTCAGGCATGCAATGTGAATGCTGCCGAAA
TTAACACTTCTCCTGTAGTTCTGAAGTGTGGGACTTTAAAGGTTCTTAGACATATTGATG
CATATTTCATCTTTGAACCATATTTGTTGCTATTAATGAGATCATTATCTGAAACTTTCA
GACTTTGCTGTTCAGTTCACATGGCTAGTGATGTTAAATAAAGGCCCA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-539, gnl|bosTau2|chr17 (41050501-41051047)
               

               
               1-539, gnl|Hg17|chr22 (27606838-27607929)
               

               
               1-539, gnl|Mm7|chr11 (5394245-5393729)
               


               
               559-1008, gnl|bosTau2|chr17 (41051110-41051569)
               

               
               559-1008, gnl|Hg17|chr22 (27607974-27608417)
               

               
               559-1008, gnl|Mm7|chr11 (5393698-5393286)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-539, gnl|bosTau2|chr17 (41050501-41051047)
               

               
               1-539, gnl|Hg17|chr22 (27606838-27607929)
               

               
               1-539, gnl|Mm7|chr11 (5394245-5393729)
               


               
               559-1008, gnl|bosTau2|chr17 (41051110-41051569)
               

               
               559-1008, gnl|Hg17|chr22 (27607974-27608417)
               

               
               559-1008, gnl|Mm7|chr11 (5393698-5393286)

	1-539, gnl\|bosTau2\|chr17 (41050501-41051047)
	1-539, gnl\|Hg17\|chr22 (27606838-27607929)
	1-539, gnl\|Mm7\|chr11 (5394245-5393729)

	559-1008, gnl\|bosTau2\|chr17 (41051110-41051569)
	559-1008, gnl\|Hg17\|chr22 (27607974-27608417)
	559-1008, gnl\|Mm7\|chr11 (5393698-5393286)