Non-Coding RNA Search

Ss1.1-Pig3-SRG8027J19.5

Sequence:


               
               AATGGAGTCACGTGGAAGGGAAGTGGAGCCAGTGACAAGAGGTTGTGGTTTTTGACTGGG
GCCTGTCTAGCCTCCGGGAGGCCCCCTCAGATGTCAAGGCGGCGGGGGCAGCGTTCTGAG
GTTTGCTGCTCACGCCACGCCCAGAGCTGCTCCTGTGTCTGTGCAGGAGTGGGAGGGGCG
CTGAGTCCTGGGAGCATGAGGCCGGCAGGTCAGCCTCCTGAAGGAGGGCAGTCAGCCAGC
TCTGCCCCCTGCTCTGCCCTGACTTATTTATTCCCCAAATCGGGAGCTTTTCTGACTTTT
CTCTTTGCCTCTTCCAGATCTGCGATGCCATCTCCAAGTGGGAGCAAGCCCTGAAGGAGC
TGCACTCTGGAAAGTCTGAGGGTGGCTCACGTGTCGTGAAGCTGATATATAAGAACAGGT
CCTGAGCACCCCTGGAGGCGGGGGACCAAGCAGGATGGCTGCCACTGGGGTGCAGTCTTC
AATTCCCCAACTGGAGGCCCGGCCTGCACAGGCAGGGAGCCCACACGTACAACAATGCGT
GGTGGTCATCAGCTGGGGCCCAGGCTGGCTCTGCTGGTCTCTGTGAGGCCATGGGAAGCT
CAGGCTTTCAGTCCCTGAACTAGGTCTGCATACTCACACATCACATGTCCATGTGCACAC
ATGTGCACACACACCTGCCCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGGAGTCACGTGGAAGGGAAGTGGAGCCAGTGACAAGAGGTTGTGGTTTTTGACTGGG
GCCTGTCTAGCCTCCGGGAGGCCCCCTCAGATGTCAAGGCGGCGGGGGCAGCGTTCTGAG
GTTTGCTGCTCACGCCACGCCCAGAGCTGCTCCTGTGTCTGTGCAGGAGTGGGAGGGGCG
CTGAGTCCTGGGAGCATGAGGCCGGCAGGTCAGCCTCCTGAAGGAGGGCAGTCAGCCAGC
TCTGCCCCCTGCTCTGCCCTGACTTATTTATTCCCCAAATCGGGAGCTTTTCTGACTTTT
CTCTTTGCCTCTTCCAGATCTGCGATGCCATCTCCAAGTGGGAGCAAGCCCTGAAGGAGC
TGCACTCTGGAAAGTCTGAGGGTGGCTCACGTGTCGTGAAGCTGATATATAAGAACAGGT
CCTGAGCACCCCTGGAGGCGGGGGACCAAGCAGGATGGCTGCCACTGGGGTGCAGTCTTC
AATTCCCCAACTGGAGGCCCGGCCTGCACAGGCAGGGAGCCCACACGTACAACAATGCGT
GGTGGTCATCAGCTGGGGCCCAGGCTGGCTCTGCTGGTCTCTGTGAGGCCATGGGAAGCT
CAGGCTTTCAGTCCCTGAACTAGGTCTGCATACTCACACATCACATGTCCATGTGCACAC
ATGTGCACACACACCTGCCCCAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               204-299, - strand, RNAz p=0.826199

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               204-299, - strand, RNAz p=0.826199

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               27-641, gnl|bosTau2|chr10 (52867297-52867905)
               

               
               27-641, gnl|Hg17|chr14 (67117062-67117757)
               

               
               27-641, gnl|Mm7|chr12 (77032748-77033392)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-641, gnl|bosTau2|chr10 (52867297-52867905)
               

               
               27-641, gnl|Hg17|chr14 (67117062-67117757)
               

               
               27-641, gnl|Mm7|chr12 (77032748-77033392)

	27-641, gnl\|bosTau2\|chr10 (52867297-52867905)
	27-641, gnl\|Hg17\|chr14 (67117062-67117757)
	27-641, gnl\|Mm7\|chr12 (77032748-77033392)