Ss1.1-Pig3-SRG8027O11.3
               |  | CATCCAAGGCTATGTTCTAATGAAAATGTATTTGAACTGATTAACTCAGGTCAGGATTGA
CTTTTACCACAACTGAATGTGAGCTGGAACATATTTTTTTAAATTACTGGAATGTTTTCT
CAATTATTATTCACCATGATGTTCTCTCTTTGGAATTTTTTGTTCATTTCCAGTTGGCTT
CTAGCACTCTCCTTTCTTACCTCTTAACTCTTCCCCTCTGGTTACCCTACACTTGCCCCT
GATTGGATCCAGTTTGCATGCAGTGGTAGCTGCTGTGGGGCTGCGGTTAAATAGAACTGC
TCAGACTGCAACAGGAAAGCATTGAATCGAAAGCAAGGGGGAGGAAGCACAAACCGATAC
CCACCACAAAGCTGCTGAGTGCCCAGCATGACCCAAGCCGCACCCTCTGATGAGGAGTCT
TGTGGAGGAGCAAGAAGCCACAGAGTTTAATAAATCATCAGCACAGCCCATTCTCCACTT
CCCGTGATCCAGCCTTCTGGGTCACCATGAGTGTCACCAGGTATTGGCCTAAGAAGGTAG
GTAATGACAGAAAAGCCACCAGAGAGGCAGAGGCTGGGGAAAAGTCCCCGAAATGAATGG
CTGTGGACCATTTATTTCAAAATCCCCTCATAGTGCAGCTCTGTGAGCAGGAACCTCCCA
GGGATACAAGTGTTTCTAAGGAGCTCTCTACCTGATATAGGCTCCCATGTTCCCTGAAAA
ATACACTGGCTACCTGCCTGAAAGGCTGCTTCTAGG | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CATCCAAGGCTATGTTCTAATGAAAATGTATTTGAACTGATTAACTCAGGTCAGGATTGA
CTTTTACCACAACTGAATGTGAGCTGGAACATATTTTTTTAAATTACTGGAATGTTTTCT
CAATTATTATTCACCATGATGTTCTCTCTTTGGAATTTTTTGTTCATTTCCAGTTGGCTT
CTAGCACTCTCCTTTCTTACCTCTTAACTCTTCCCCTCTGGTTACCCTACACTTGCCCCT
GATTGGATCCAGTTTGCATGCAGTGGTAGCTGCTGTGGGGCTGCGGTTAAATAGAACTGC
TCAGACTGCAACAGGAAAGCATTGAATCGAAAGCAAGGGGGAGGAAGCACAAACCGATAC
CCACCACAAAGCTGCTGAGTGCCCAGCATGACCCAAGCCGCACCCTCTGATGAGGAGTCT
TGTGGAGGAGCAAGAAGCCACAGAGTTTAATAAATCATCAGCACAGCCCATTCTCCACTT
CCCGTGATCCAGCCTTCTGGGTCACCATGAGTGTCACCAGGTATTGGCCTAAGAAGGTAG
GTAATGACAGAAAAGCCACCAGAGAGGCAGAGGCTGGGGAAAAGTCCCCGAAATGAATGG
CTGTGGACCATTTATTTCAAAATCCCCTCATAGTGCAGCTCTGTGAGCAGGAACCTCCCA
GGGATACAAGTGTTTCTAAGGAGCTCTCTACCTGATATAGGCTCCCATGTTCCCTGAAAA
ATACACTGGCTACCTGCCTGAAAGGCTGCTTCTAGG | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map