Non-Coding RNA Search

Ss1.1-Pig3-SRG8028C16.5

Sequence:


               
               AGCCTGCACGAAGCAACCGTCGGAAAGGAAGGCTTGCCGCTCTTTTAACCTAAACCCCAT
ATGTGGTTGTTGAAGGCCATTCTTTTTATTCACTCACGGGTTGAGAGAGAATAGAGCGAC
TCTTCCCTCCCATGTTTCAATGAAGGACTTTTTTAGCTCTCTCGTGATTATTCTTTGCTC
CCTCTTCTTTTGGGATCCGTGAGTTACATCAGTGCTTAACCAGAATTCCCCCTTTGTATC
ATTTTCCCAAGACATCTCCCCAGGACACATCTGCTTCTAAGCCCCCTGGACATCGTACCT
GTGAATGTACACCTTCAATCCCTGTTAGTTACACAGTCTGTAGAGTATTTACCAAGTATA
GATTCCAGCAGTTTTTCACTTCAGGTGGTTTTGCTGCGTTATTTAGACAAGGCAAATATT
CCATGTACAGGATTTGACTTTAAAGAGACAAGGGAGCCAGAGGATCAGAAATCACACGTG
ACAGAGCCTCCTAAGGTACATCTCCAGCCTCTCTTTAATGAAGTCCACATTTTATAACAA
TGCTCCCACGCAAATGCAAATTTCTGTAGATTGTTTATTTAGACTAGCGCTTTTGTACAT
CCGTCTTTCTCGGTGTTCACCCCCCTCCCCCCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCTGCACGAAGCAACCGTCGGAAAGGAAGGCTTGCCGCTCTTTTAACCTAAACCCCAT
ATGTGGTTGTTGAAGGCCATTCTTTTTATTCACTCACGGGTTGAGAGAGAATAGAGCGAC
TCTTCCCTCCCATGTTTCAATGAAGGACTTTTTTAGCTCTCTCGTGATTATTCTTTGCTC
CCTCTTCTTTTGGGATCCGTGAGTTACATCAGTGCTTAACCAGAATTCCCCCTTTGTATC
ATTTTCCCAAGACATCTCCCCAGGACACATCTGCTTCTAAGCCCCCTGGACATCGTACCT
GTGAATGTACACCTTCAATCCCTGTTAGTTACACAGTCTGTAGAGTATTTACCAAGTATA
GATTCCAGCAGTTTTTCACTTCAGGTGGTTTTGCTGCGTTATTTAGACAAGGCAAATATT
CCATGTACAGGATTTGACTTTAAAGAGACAAGGGAGCCAGAGGATCAGAAATCACACGTG
ACAGAGCCTCCTAAGGTACATCTCCAGCCTCTCTTTAATGAAGTCCACATTTTATAACAA
TGCTCCCACGCAAATGCAAATTTCTGTAGATTGTTTATTTAGACTAGCGCTTTTGTACAT
CCGTCTTTCTCGGTGTTCACCCCCCTCCCCCCAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               80-188, + strand, RNAz p=0.660077

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-188, + strand, RNAz p=0.660077

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-630, gnl|bosTau2|chr4 (40795939-40796570)
               

               
               1-630, gnl|Hg17|chr7 (25440776-25441399)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-630, gnl|bosTau2|chr4 (40795939-40796570)
               

               
               1-630, gnl|Hg17|chr7 (25440776-25441399)

	1-630, gnl\|bosTau2\|chr4 (40795939-40796570)
	1-630, gnl\|Hg17\|chr7 (25440776-25441399)