Non-Coding RNA Search

Ss1.1-Pig3-SRG8028H20.3

Sequence:


               
               GGCTGAGCCAAGGCCCTGGGGATGGGACTTGTGGGGCTTCAGGTGTTCCAAGTAAGTCAC
AGCTTTTTGTTCCTAGACACTACAAGAGATCCGAGACCAGGAGAAGAGAACGGCAAAGGT
GAGCTTGGCCAGCCAGCCTCAGAGCCCTCCCCCTATCAGAGTGATGCGGGAGACTGCATG
AATCCCTCCTCCAGAGTGGGTGGGCCTAATTAGGAACTAAGCATCAAGATGCGTGCTTGT
GCTCAATGTCCACATGAGAGCCTGAGTTGGGGCTCTGATCCCAGCACGAGGCAGCTGAGA
GGCACCTTTCCTCAGCATGTGTGCTGCCCTCCATGCTGTGTGGCCAAGTTCATAGCCATG
TACCATTAGGGTTCTCCTGTCATCACAAGCATTTTCCTTAGTAGGGCTTTTGTGCCTGCC
TGACTTCATAGCATGAAAGTCATCCCAGCCTCCCCTTTCAGAGCCAACAGTCTTCATTTC
TCCCAACTTCCCCTGCTGATGCTGGGAGTCTCCAGTCTCCCTGTGCCAGCCTACCCTGCT
GACTCCAGTGATCTCCAGTCCCTCCTCTGTTTCCTCAGACATCTCCCAGCCCAGTGGCCT
GAGCTGCCTTCGTTGTAATTGAACAGACAGGATTATGAGGAAAGAAACAGGTTCTGGCTG
TTCTTGGTCCCCAAGCACCCTGGTAGCCTGGCTGTGAGACTACTCAGGCAGCTCCTGCTC
TTGGTCCCCAAGTGCCCTGGTAGCCTGGCTGTGAGAATACTCAGGCAGCTCCTCATCCTT
TGCAGACTACTACTTTGTGACCAGGGAGGTGATGCAGCGGGACATTGCTGCTGGAGACTT
CATCGAGCATGCTGAGTTCTCAGGGAACTTGTATGGGACCAGGTGGGCCATGCTTAGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGAGCCAAGGCCCTGGGGATGGGACTTGTGGGGCTTCAGGTGTTCCAAGTAAGTCAC
AGCTTTTTGTTCCTAGACACTACAAGAGATCCGAGACCAGGAGAAGAGAACGGCAAAGGT
GAGCTTGGCCAGCCAGCCTCAGAGCCCTCCCCCTATCAGAGTGATGCGGGAGACTGCATG
AATCCCTCCTCCAGAGTGGGTGGGCCTAATTAGGAACTAAGCATCAAGATGCGTGCTTGT
GCTCAATGTCCACATGAGAGCCTGAGTTGGGGCTCTGATCCCAGCACGAGGCAGCTGAGA
GGCACCTTTCCTCAGCATGTGTGCTGCCCTCCATGCTGTGTGGCCAAGTTCATAGCCATG
TACCATTAGGGTTCTCCTGTCATCACAAGCATTTTCCTTAGTAGGGCTTTTGTGCCTGCC
TGACTTCATAGCATGAAAGTCATCCCAGCCTCCCCTTTCAGAGCCAACAGTCTTCATTTC
TCCCAACTTCCCCTGCTGATGCTGGGAGTCTCCAGTCTCCCTGTGCCAGCCTACCCTGCT
GACTCCAGTGATCTCCAGTCCCTCCTCTGTTTCCTCAGACATCTCCCAGCCCAGTGGCCT
GAGCTGCCTTCGTTGTAATTGAACAGACAGGATTATGAGGAAAGAAACAGGTTCTGGCTG
TTCTTGGTCCCCAAGCACCCTGGTAGCCTGGCTGTGAGACTACTCAGGCAGCTCCTGCTC
TTGGTCCCCAAGTGCCCTGGTAGCCTGGCTGTGAGAATACTCAGGCAGCTCCTCATCCTT
TGCAGACTACTACTTTGTGACCAGGGAGGTGATGCAGCGGGACATTGCTGCTGGAGACTT
CATCGAGCATGCTGAGTTCTCAGGGAACTTGTATGGGACCAGGTGGGCCATGCTTAGGGC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               11-132, gnl|bosTau2|chr7 (1691133-1691254)
               

               
               11-132, gnl|Mm7|chr11 (59268067-59267932)
               


               
               768-900, gnl|bosTau2|chr7 (1691328-1691459)
               

               
               768-900, gnl|Hg17|chr1 (224641259-224641385)
               

               
               768-900, gnl|Mm7|chr11 (59267766-59267465)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-132, gnl|bosTau2|chr7 (1691133-1691254)
               

               
               11-132, gnl|Mm7|chr11 (59268067-59267932)
               


               
               768-900, gnl|bosTau2|chr7 (1691328-1691459)
               

               
               768-900, gnl|Hg17|chr1 (224641259-224641385)
               

               
               768-900, gnl|Mm7|chr11 (59267766-59267465)

	11-132, gnl\|bosTau2\|chr7 (1691133-1691254)
	11-132, gnl\|Mm7\|chr11 (59268067-59267932)

	768-900, gnl\|bosTau2\|chr7 (1691328-1691459)
	768-900, gnl\|Hg17\|chr1 (224641259-224641385)
	768-900, gnl\|Mm7\|chr11 (59267766-59267465)