Non-Coding RNA Search

Ss1.1-Pig3-SRG8028P10.5

Sequence:


               
               GCTGATTAACTGAAGGGCCCTGCCTGCCCCCAGCAGCCCCGCCCCACCTCTGCCTCCTCA
CAGATGGACTGACAGGCCTTCTGCCTGCACAGGATGTGGGATGCGAGGTGCTGGCCTCAG
GTTATGGGGAGGCCTCCCCCTTTCCTACCCACCTGCCAGCCAACATGGTCCCGGGGATGG
GAGGATACGGGTGAGGAGCCTGTTGGGGGTTGGGTCCCTTCCTTCCTAATGGAAAGGCCT
AGCCAGTCTTCTGACCTCCGACCTCTCATGTGATGGGCCACAAGGGAGGTGACCGGGTCC
AAAGAGAGGTCCCGCACCTGCCTTTGGAGGGGCAGTGAGGACCCTCAACTTATTGAGAAG
CACTTAATGCCTTTGTATTTATTTCAGGTTGAGTCTGTTTGTTTGCCTTCCCTGAATTTT
AGCAGGGAGGTTGTTCTAGTTTCTAGTAAGACTTCTCCTCAGACAGGCCCAGCGCTGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGATTAACTGAAGGGCCCTGCCTGCCCCCAGCAGCCCCGCCCCACCTCTGCCTCCTCA
CAGATGGACTGACAGGCCTTCTGCCTGCACAGGATGTGGGATGCGAGGTGCTGGCCTCAG
GTTATGGGGAGGCCTCCCCCTTTCCTACCCACCTGCCAGCCAACATGGTCCCGGGGATGG
GAGGATACGGGTGAGGAGCCTGTTGGGGGTTGGGTCCCTTCCTTCCTAATGGAAAGGCCT
AGCCAGTCTTCTGACCTCCGACCTCTCATGTGATGGGCCACAAGGGAGGTGACCGGGTCC
AAAGAGAGGTCCCGCACCTGCCTTTGGAGGGGCAGTGAGGACCCTCAACTTATTGAGAAG
CACTTAATGCCTTTGTATTTATTTCAGGTTGAGTCTGTTTGTTTGCCTTCCCTGAATTTT
AGCAGGGAGGTTGTTCTAGTTTCTAGTAAGACTTCTCCTCAGACAGGCCCAGCGCTGTCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               171-432, - strand, RNAz p=0.997463

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               171-432, - strand, RNAz p=0.997463

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               88-479, gnl|bosTau2|chr2 (82639190-82639601)
               

               
               88-479, gnl|Hg17|chr1 (23581632-23581205)
               

               
               88-479, gnl|Mm7|chr4 (135571531-135571886)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               88-479, gnl|bosTau2|chr2 (82639190-82639601)
               

               
               88-479, gnl|Hg17|chr1 (23581632-23581205)
               

               
               88-479, gnl|Mm7|chr4 (135571531-135571886)

	88-479, gnl\|bosTau2\|chr2 (82639190-82639601)
	88-479, gnl\|Hg17\|chr1 (23581632-23581205)
	88-479, gnl\|Mm7\|chr4 (135571531-135571886)