Ss1.1-Pig4-TMW8001C03.3
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GAATTAATCCCATCAAGAACCTGGTACTATTTTAAATAAACGCACTAGCGTGGCAGTGAC
AAAAGTATGCTTAAATTTTTTCAAAAGGAAATAAGGGGTTAGATAAATCTAAAGTTCTTA
GCGTGATCCAAACAAGGTCATCTGAGAATGTGTACTTCAGAGTATAATTAAGTAGGAAGA
GTTTAAGATGGTAATGGTAGTCCTATGAAATTCCCAATGGTACAGTTGTAAATTCTAGCT
TTTTGACAAGGAAAGTACCATGAAAAAAAAGAATCAAACCATAGTCTTTTAAAATCCACA
GCAGCATTGACCTTTACTGTGAAAGCTTAACTGCATGTTCCTTATCAATCAAAACTAAAT
TAAAATGAACTAAGAGAAAGCACATACATTAAGCTTTGCAAAATTGTGACATTAATATTC
CAGCTATGTCACCTTCGCCTGCATCGGGATTGAGCAAGGGTGAAAGAGAGAGAGAAATCA
GTTCCACGAATTTTGGAGAATGTCAGATTCCAGATTACCAAGAACAGGACATCTTCCTCT
GGAGGAAAGAAACTGGATTTGGATTTAGGATTCTGGGTGGCAATGAACCAGGGGAACCTA
TTTATATCGGTCACATCGTACCACTGGGTGCTGCTGATACGGATGGCCGCCTGAGGTCTG
GGGATGAATTAATCTGTGTGGATGGGACACCTGTCATTGGAAAGTCACACCAGCTTGTGG
TCCAGCTTATGCAACAAGCCGCCAAGCAAGGCCACGTCAATCTCACAGTGCGGCGTAAAG
TGGTGTTTGCAG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GAATTAATCCCATCAAGAACCTGGTACTATTTTAAATAAACGCACTAGCGTGGCAGTGAC
AAAAGTATGCTTAAATTTTTTCAAAAGGAAATAAGGGGTTAGATAAATCTAAAGTTCTTA
GCGTGATCCAAACAAGGTCATCTGAGAATGTGTACTTCAGAGTATAATTAAGTAGGAAGA
GTTTAAGATGGTAATGGTAGTCCTATGAAATTCCCAATGGTACAGTTGTAAATTCTAGCT
TTTTGACAAGGAAAGTACCATGAAAAAAAAGAATCAAACCATAGTCTTTTAAAATCCACA
GCAGCATTGACCTTTACTGTGAAAGCTTAACTGCATGTTCCTTATCAATCAAAACTAAAT
TAAAATGAACTAAGAGAAAGCACATACATTAAGCTTTGCAAAATTGTGACATTAATATTC
CAGCTATGTCACCTTCGCCTGCATCGGGATTGAGCAAGGGTGAAAGAGAGAGAGAAATCA
GTTCCACGAATTTTGGAGAATGTCAGATTCCAGATTACCAAGAACAGGACATCTTCCTCT
GGAGGAAAGAAACTGGATTTGGATTTAGGATTCTGGGTGGCAATGAACCAGGGGAACCTA
TTTATATCGGTCACATCGTACCACTGGGTGCTGCTGATACGGATGGCCGCCTGAGGTCTG
GGGATGAATTAATCTGTGTGGATGGGACACCTGTCATTGGAAAGTCACACCAGCTTGTGG
TCCAGCTTATGCAACAAGCCGCCAAGCAAGGCCACGTCAATCTCACAGTGCGGCGTAAAG
TGGTGTTTGCAG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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442-538, - strand, RNAmicro p=0.945182 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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442-538, - strand, RNAmicro p=0.945182 |
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57-507, gnl|bosTau2|chr22 (26384535-26384080) |
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57-507, gnl|Hg17|chr3 (65348325-65347858) |
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57-507, gnl|Mm7|chr6 (93792852-93792378) |
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595-790, gnl|bosTau2|chr22 (26378873-26378678) |
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595-790, gnl|canFam2|chr20 (28923355-28923146) |
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595-790, gnl|danRer3|chr11 (19035861-19035653) |
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595-790, gnl|dasNov1|scaffold_248 (112823-113032) |
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595-790, gnl|echTel1|scaffold_308238 (30757-30966) |
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595-790, gnl|fr1|chrUn (178694222-178694041) |
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595-790, gnl|galGal2|chr12 (14012793-14012992) |
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595-790, gnl|hg17|chr3 (65342584-65342793) |
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595-790, gnl|Hg17|chr3 (65342789-65342594) |
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595-790, gnl|loxAfr1|scaffold_802 (125425-125216) |
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595-790, gnl|mm7|chr6 (93787709-93787918) |
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595-790, gnl|Mm7|chr6 (93787914-93787719) |
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595-790, gnl|monDom2|scaffold_5 (11900004-11900213) |
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595-790, gnl|oryCun1|scaffold_198846 (203230-203021) |
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595-790, gnl|panTro1|chrUn_random (22944509-22944300) |
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595-790, gnl|rheMac2|chr2 (71029105-71028896) |
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595-790, gnl|rn3|chr4 (10048571-10048774) |
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595-790, gnl|tetNig1|chr11 (1618355-1618157) |
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595-790, gnl|xenTro1|scaffold_526 (348208-348002) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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57-507, gnl|bosTau2|chr22 (26384535-26384080) |
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57-507, gnl|Hg17|chr3 (65348325-65347858) |
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57-507, gnl|Mm7|chr6 (93792852-93792378) |
| |
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595-790, gnl|bosTau2|chr22 (26378873-26378678) |
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595-790, gnl|canFam2|chr20 (28923355-28923146) |
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595-790, gnl|danRer3|chr11 (19035861-19035653) |
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595-790, gnl|dasNov1|scaffold_248 (112823-113032) |
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595-790, gnl|echTel1|scaffold_308238 (30757-30966) |
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595-790, gnl|fr1|chrUn (178694222-178694041) |
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595-790, gnl|galGal2|chr12 (14012793-14012992) |
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595-790, gnl|hg17|chr3 (65342584-65342793) |
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595-790, gnl|Hg17|chr3 (65342789-65342594) |
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595-790, gnl|loxAfr1|scaffold_802 (125425-125216) |
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595-790, gnl|mm7|chr6 (93787709-93787918) |
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595-790, gnl|Mm7|chr6 (93787914-93787719) |
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595-790, gnl|monDom2|scaffold_5 (11900004-11900213) |
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595-790, gnl|oryCun1|scaffold_198846 (203230-203021) |
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595-790, gnl|panTro1|chrUn_random (22944509-22944300) |
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595-790, gnl|rheMac2|chr2 (71029105-71028896) |
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595-790, gnl|rn3|chr4 (10048571-10048774) |
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595-790, gnl|tetNig1|chr11 (1618355-1618157) |
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595-790, gnl|xenTro1|scaffold_526 (348208-348002) |
