Ss1.1-Pig4-TMW8001M12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCTGGGGTGCCCCCATGCTATTCGTCATCCCCTGGGCAGTGGTCAAGTGTCTGTTTGA GAACATCCAGTGCTGGACCAGCAATGACAACATGGGCTTCTGGTGGATCCTGCGCTTCCC CGTCTTCCTGGCCATCCTGATCAACTTCTCCATCTTCATCCGCGTCCTCCACGTGCTGGT GGCCAAGCTGCGAGCCCATCAGATGCGCTGCACTGACTACAAATTCCGGCTGGCCAGGTC CACGCTGACGCTCATCCCGCTGCTGGGGGTCCACGAGGTGGTGTTTGCCTTCGTGACGGA CGAGCACGCCCAGGGCGCCCTGCGCTCCGCCAAGCTCTTCTTTGACCTCTTCCTCAGCTC CTTCCAGGGCCTGCTGGTGGCGGTTCTCTACTGTTTCCTCAACAAGGAGGTGCAGGCAGA GCTGCTGCGGCGCTGGCACCGCTGGCGCGAGGGCAAAGCGTTGCAGAAGGCGCACCGCGT TGGCAGCCACTCGGCCCGGCCCCCCAGCGGTCCCCCCAGCGAGAAGCTGCTGCTCTCGAC GGGTGGCAGCAGCAATGGCACCAGCCAGGAGCCCTCTGCAGAGACCCACTTGGCCAGCGG CCTCCCTGGAGTGGCCGAGAACCCCTTCTGAAGCCGCTGCAACTCCAGCCGGGGCTGGAC TCTGGTGCCCAAAGAGCATGTTGCCAAACAATCCCAAACTGGTGCCCAACAGAGGCTGGA GGCATGGGAGCCAGACAGTGCCCCACTACCCATGTGTCCCTGGTGTGGTGGTCTGAGAGC ACCTGCTCTGTGCCCAGCGGTGGGGACAGGAAGCTGTCCCGTGAACGCGCGCCTGAGTTA GGGGAAACTTGAGTCGGACAATAAAGAGCTCTGTGCACACGCGGGGCGGAGAGCTGGGCG GAGGGCTGGGGCCCTGGACGGGCCGCACCGTGGGCTCCGTCTGGGGCCTCTCCGTCCAGG CCGCCCCATTGTACAGGCGTGTTGGAGCTGGAATAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCTGGGGTGCCCCCATGCTATTCGTCATCCCCTGGGCAGTGGTCAAGTGTCTGTTTGA GAACATCCAGTGCTGGACCAGCAATGACAACATGGGCTTCTGGTGGATCCTGCGCTTCCC CGTCTTCCTGGCCATCCTGATCAACTTCTCCATCTTCATCCGCGTCCTCCACGTGCTGGT GGCCAAGCTGCGAGCCCATCAGATGCGCTGCACTGACTACAAATTCCGGCTGGCCAGGTC CACGCTGACGCTCATCCCGCTGCTGGGGGTCCACGAGGTGGTGTTTGCCTTCGTGACGGA CGAGCACGCCCAGGGCGCCCTGCGCTCCGCCAAGCTCTTCTTTGACCTCTTCCTCAGCTC CTTCCAGGGCCTGCTGGTGGCGGTTCTCTACTGTTTCCTCAACAAGGAGGTGCAGGCAGA GCTGCTGCGGCGCTGGCACCGCTGGCGCGAGGGCAAAGCGTTGCAGAAGGCGCACCGCGT TGGCAGCCACTCGGCCCGGCCCCCCAGCGGTCCCCCCAGCGAGAAGCTGCTGCTCTCGAC GGGTGGCAGCAGCAATGGCACCAGCCAGGAGCCCTCTGCAGAGACCCACTTGGCCAGCGG CCTCCCTGGAGTGGCCGAGAACCCCTTCTGAAGCCGCTGCAACTCCAGCCGGGGCTGGAC TCTGGTGCCCAAAGAGCATGTTGCCAAACAATCCCAAACTGGTGCCCAACAGAGGCTGGA GGCATGGGAGCCAGACAGTGCCCCACTACCCATGTGTCCCTGGTGTGGTGGTCTGAGAGC ACCTGCTCTGTGCCCAGCGGTGGGGACAGGAAGCTGTCCCGTGAACGCGCGCCTGAGTTA GGGGAAACTTGAGTCGGACAATAAAGAGCTCTGTGCACACGCGGGGCGGAGAGCTGGGCG GAGGGCTGGGGCCCTGGACGGGCCGCACCGTGGGCTCCGTCTGGGGCCTCTCCGTCCAGG CCGCCCCATTGTACAGGCGTGTTGGAGCTGGAATAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 592-745, - strand, RNAz p=0.895747 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 592-745, - strand, RNAz p=0.895747 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 228-372, gnl|bosTau2|chr18 (38257015-38256870) | |
| 228-372, gnl|canFam2|chr1 (112793624-112793467) | |
| 228-372, gnl|danRer3|chr15 (36997618-36997473) | |
| 228-372, gnl|dasNov1|scaffold_71053 (296-146) | |
| 228-372, gnl|echTel1|scaffold_321100 (35193-35044) | |
| 228-372, gnl|fr1|chrUn (127553807-127553650) | |
| 228-372, gnl|galGal2|chr27 (169223-169077) | |
| 228-372, gnl|hg17|chr19 (50873178-50873335) | |
| 228-372, gnl|Hg17|chr19 (50873185-50873330) | |
| 228-372, gnl|loxAfr1|scaffold_1798 (126132-125983) | |
| 228-372, gnl|mm7|chr7 (16842037-16841880) | |
| 228-372, gnl|Mm7|chr7 (16842028-16841883) | |
| 228-372, gnl|monDom2|scaffold_205 (712714-712564) | |
| 228-372, gnl|oryCun1|scaffold_194191 (16925-17082) | |
| 228-372, gnl|panTro1|chr20 (48164111-48164268) | |
| 228-372, gnl|rheMac2|chr19 (52125925-52126082) | |
| 228-372, gnl|rn3|chr1 (78596627-78596470) | |
| 228-372, gnl|tetNig1|chr3 (10860118-10859963) | |
| 228-372, gnl|xenTro1|scaffold_973 (337321-337164) | |
| 408-809, gnl|bosTau2|chr19 (45349261-45349661) | |
| 408-809, gnl|Hg17|chr17_random (1869566-1869993) | |
| 408-809, gnl|Mm7|chr11 (120647504-120647916) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 228-372, gnl|bosTau2|chr18 (38257015-38256870) | |
| 228-372, gnl|canFam2|chr1 (112793624-112793467) | |
| 228-372, gnl|danRer3|chr15 (36997618-36997473) | |
| 228-372, gnl|dasNov1|scaffold_71053 (296-146) | |
| 228-372, gnl|echTel1|scaffold_321100 (35193-35044) | |
| 228-372, gnl|fr1|chrUn (127553807-127553650) | |
| 228-372, gnl|galGal2|chr27 (169223-169077) | |
| 228-372, gnl|hg17|chr19 (50873178-50873335) | |
| 228-372, gnl|Hg17|chr19 (50873185-50873330) | |
| 228-372, gnl|loxAfr1|scaffold_1798 (126132-125983) | |
| 228-372, gnl|mm7|chr7 (16842037-16841880) | |
| 228-372, gnl|Mm7|chr7 (16842028-16841883) | |
| 228-372, gnl|monDom2|scaffold_205 (712714-712564) | |
| 228-372, gnl|oryCun1|scaffold_194191 (16925-17082) | |
| 228-372, gnl|panTro1|chr20 (48164111-48164268) | |
| 228-372, gnl|rheMac2|chr19 (52125925-52126082) | |
| 228-372, gnl|rn3|chr1 (78596627-78596470) | |
| 228-372, gnl|tetNig1|chr3 (10860118-10859963) | |
| 228-372, gnl|xenTro1|scaffold_973 (337321-337164) | |
| 408-809, gnl|bosTau2|chr19 (45349261-45349661) | |
| 408-809, gnl|Hg17|chr17_random (1869566-1869993) | |
| 408-809, gnl|Mm7|chr11 (120647504-120647916) |