Ss1.1-Pig4-TMW8004E23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCATCCAGAACGACCTCCTTGAGTATTTCAGCTTGGTCCATTTTGTTAATTCGGGCCTC CTAGGAACTGCCCATGAGTTCAAGAAGCGTTTTGAACTGCCGATTCTGAAGGGTCGAGAT GCAGCGGCCAGTGAGGAAGACCGGCGGCTGGGAGAGGAGCGACTGCGGGAGCTCACCAGC ATTGTGAACAGGTGTCTGATACGGAGGACATCTGATATCCTTTCTAAATACCTGCCTGTG AAGATTGAGCAGGTGGTTTGTTGCAGGCTGACACCCCTTCAGACTGAATTATACAAGAGG TTTTTGAGACAGGCCAAGCCAGCAGAAGAGTTGCGTGAGGGCAAGATGAGTGTGTCTTCT CTCTCTTCCATCACGTCCCTGAAGAAGCTGTGTAACCATCCAGCTCTAATCTATGACAAG TGTGTGGAAGAGGAAGATGGCTTCGCAGGTGCCTTGGACTTCTTTCCCCCTGGTTATAGC TCCAAGGCTTTAGAGCCTCAGCTGTCAGGTAAGATGCTGGTCCTTGATTACATTCTGGCG GTGACCCGAAGCCGCAGCAGTGACAAAGTCGTGCTGGTGTCCAATTACACTCAGACATTG GACCTCTTTGAGAAACTCTGCCGGGCCCGAAGGTACCTGTATGTTCGCTTGGATGGCACA ATGTCCATTAAGAAGCGAGCCAAGGTTGTGGAGCGCTTCAACAGCCCGTCGAGTCCAGAC TTTGTCTTCATGCTGAGCAGCAAAGCTGGGGGCTGTGGCCTCAATCTCATCGGGGCTAAC CGCCTGGTCATGTTTGACCCTGACTGGAACCCAGCCAACGATGAACAAGCCATGGCCCGG GTCTGGCGTGACGGTCAAAAGAAGACCTGCTATATCTATCGCCTGCTGTCTGCAGGAACC ATTGAGGAGAAGATCTTTCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGCGTGGTG GACGAGGAGCAGGATGTGGAGCGGCACTTCTCTCTAGGCGAACTGAAGGAGCTCTTTACC CTGGATGAGGCCAGCCTCAGTGACACACATGACAGGTTGCGCTGCCGTCGCTGTGTCAAC AACCAGCAGGTGTGGCCACCCCCCGACGGTTCTGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCATCCAGAACGACCTCCTTGAGTATTTCAGCTTGGTCCATTTTGTTAATTCGGGCCTC CTAGGAACTGCCCATGAGTTCAAGAAGCGTTTTGAACTGCCGATTCTGAAGGGTCGAGAT GCAGCGGCCAGTGAGGAAGACCGGCGGCTGGGAGAGGAGCGACTGCGGGAGCTCACCAGC ATTGTGAACAGGTGTCTGATACGGAGGACATCTGATATCCTTTCTAAATACCTGCCTGTG AAGATTGAGCAGGTGGTTTGTTGCAGGCTGACACCCCTTCAGACTGAATTATACAAGAGG TTTTTGAGACAGGCCAAGCCAGCAGAAGAGTTGCGTGAGGGCAAGATGAGTGTGTCTTCT CTCTCTTCCATCACGTCCCTGAAGAAGCTGTGTAACCATCCAGCTCTAATCTATGACAAG TGTGTGGAAGAGGAAGATGGCTTCGCAGGTGCCTTGGACTTCTTTCCCCCTGGTTATAGC TCCAAGGCTTTAGAGCCTCAGCTGTCAGGTAAGATGCTGGTCCTTGATTACATTCTGGCG GTGACCCGAAGCCGCAGCAGTGACAAAGTCGTGCTGGTGTCCAATTACACTCAGACATTG GACCTCTTTGAGAAACTCTGCCGGGCCCGAAGGTACCTGTATGTTCGCTTGGATGGCACA ATGTCCATTAAGAAGCGAGCCAAGGTTGTGGAGCGCTTCAACAGCCCGTCGAGTCCAGAC TTTGTCTTCATGCTGAGCAGCAAAGCTGGGGGCTGTGGCCTCAATCTCATCGGGGCTAAC CGCCTGGTCATGTTTGACCCTGACTGGAACCCAGCCAACGATGAACAAGCCATGGCCCGG GTCTGGCGTGACGGTCAAAAGAAGACCTGCTATATCTATCGCCTGCTGTCTGCAGGAACC ATTGAGGAGAAGATCTTTCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGCGTGGTG GACGAGGAGCAGGATGTGGAGCGGCACTTCTCTCTAGGCGAACTGAAGGAGCTCTTTACC CTGGATGAGGCCAGCCTCAGTGACACACATGACAGGTTGCGCTGCCGTCGCTGTGTCAAC AACCAGCAGGTGTGGCCACCCCCCGACGGTTCTGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 72 entry(ies) | More info |
| Aligned organism(s): 72 entry(ies) | Help | Less info |
| 62-193, gnl|bosTau2|chr3 (67559050-67559181) | |
| 62-193, gnl|canFam2|chr15 (17123575-17123427) | |
| 62-193, gnl|danRer3|chr16 (12923973-12923836) | |
| 62-193, gnl|dasNov1|scaffold_5904 (5298-5447) | |
| 62-193, gnl|echTel1|scaffold_282681 (41131-40982) | |
| 62-193, gnl|fr1|chrUn (303843757-303843610) | |
| 62-193, gnl|galGal2|chr8 (21828445-21828592) | |
| 62-193, gnl|hg17|chr1 (46448333-46448482) | |
| 62-193, gnl|Hg17|chr1 (46448348-46448479) | |
| 62-193, gnl|loxAfr1|scaffold_39768 (11784-11933) | |
| 62-193, gnl|mm7|chr4 (115478414-115478265) | |
| 62-193, gnl|Mm7|chr4 (115478397-115478266) | |
| 62-193, gnl|monDom2|scaffold_70 (6782662-6782516) | |
| 62-193, gnl|oryCun1|scaffold_212736 (4420-4271) | |
| 62-193, gnl|panTro1|chr1_random (67145958-67145809) | |
| 62-193, gnl|rheMac2|chr1 (49207021-49207170) | |
| 62-193, gnl|rn3|chr5 (136233330-136233479) | |
| 62-193, gnl|tetNig1|chrUn_random (107166931-107166784) | |
| 62-193, gnl|xenTro1|scaffold_3543 (1888-1741) | |
| 257-395, gnl|bosTau2|chr3 (67560409-67560547) | |
| 257-395, gnl|canFam2|chr15 (17122026-17121849) | |
| 257-395, gnl|danRer3|chr16 (12922307-12922167) | |
| 257-395, gnl|dasNov1|scaffold_5904 (6620-6798) | |
| 257-395, gnl|echTel1|scaffold_282681 (39792-39614) | |
| 257-395, gnl|fr1|chrUn (303843240-303843084) | |
| 257-395, gnl|galGal2|chr8 (21830904-21831051) | |
| 257-395, gnl|hg17|chr1 (46450356-46450533) | |
| 257-395, gnl|Hg17|chr1 (46450362-46450492) | |
| 257-395, gnl|loxAfr1|scaffold_39768 (13102-13280) | |
| 257-395, gnl|mm7|chr4 (115476852-115476672) | |
| 257-395, gnl|Mm7|chr4 (115476842-115476709) | |
| 257-395, gnl|monDom2|scaffold_70 (6781529-6781383) | |
| 257-395, gnl|panTro1|chr1_random (67143850-67143673) | |
| 257-395, gnl|rn3|chr5 (136235318-136235498) | |
| 257-395, gnl|tetNig1|chrUn_random (107166473-107166328) | |
| 257-395, gnl|xenTro1|scaffold_14 (2744273-2744131) | |
| 507-635, gnl|bosTau2|chr3 (67561311-67561439) | |
| 507-635, gnl|canFam2|chr15 (17121131-17120982) | |
| 507-635, gnl|danRer3|chr16 (12921077-12920932) | |
| 507-635, gnl|dasNov1|scaffold_5904 (7796-7944) | |
| 507-635, gnl|fr1|chrUn (303842725-303842581) | |
| 507-635, gnl|galGal2|chr8 (21831381-21831524) | |
| 507-635, gnl|hg17|chr1 (46451298-46451447) | |
| 507-635, gnl|Hg17|chr1 (46451314-46451442) | |
| 507-635, gnl|loxAfr1|scaffold_39768 (14040-14188) | |
| 507-635, gnl|mm7|chr4 (115475920-115475771) | |
| 507-635, gnl|Mm7|chr4 (115475902-115475774) | |
| 507-635, gnl|monDom2|scaffold_70 (6780240-6780085) | |
| 507-635, gnl|oryCun1|scaffold_212736 (1891-1742) | |
| 507-635, gnl|panTro1|chr1_random (67142855-67142706) | |
| 507-635, gnl|rn3|chr5 (136236229-136236378) | |
| 507-635, gnl|tetNig1|chrUn_random (107166024-107165897) | |
| 507-635, gnl|xenTro1|scaffold_14 (2743439-2743300) | |
| 745-928, gnl|bosTau2|chr22 (37578022-37578205) | |
| 745-928, gnl|canFam2|chr20 (40973797-40973572) | |
| 745-928, gnl|danRer3|chr6 (30743167-30743389) | |
| 745-928, gnl|dasNov1|scaffold_20361 (4454-4679) | |
| 745-928, gnl|echTel1|scaffold_266207 (15567-15342) | |
| 745-928, gnl|fr1|chrUn (196352639-196352856) | |
| 745-928, gnl|galGal2|chr12 (2353914-2353689) | |
| 745-928, gnl|hg17|chr3 (51654066-51654291) | |
| 745-928, gnl|Hg17|chr3 (51654081-51654264) | |
| 745-928, gnl|loxAfr1|scaffold_33435 (13094-12869) | |
| 745-928, gnl|mm7|chr9 (106433734-106433509) | |
| 745-928, gnl|Mm7|chr9 (106433717-106433534) | |
| 745-928, gnl|monDom2|scaffold_5 (71922283-71922058) | |
| 745-928, gnl|oryCun1|scaffold_206513 (73235-73010) | |
| 745-928, gnl|panTro1|chr2 (53254206-53254431) | |
| 745-928, gnl|rheMac2|chr2 (84790674-84790449) | |
| 745-928, gnl|rn3|chr8 (111916157-111915932) | |
| 745-928, gnl|tetNig1|chr9 (526017-526246) | |
| 745-928, gnl|xenTro1|scaffold_189 (963329-963549) |
| Aligned organism(s): 72 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 62-193, gnl|bosTau2|chr3 (67559050-67559181) | |
| 62-193, gnl|canFam2|chr15 (17123575-17123427) | |
| 62-193, gnl|danRer3|chr16 (12923973-12923836) | |
| 62-193, gnl|dasNov1|scaffold_5904 (5298-5447) | |
| 62-193, gnl|echTel1|scaffold_282681 (41131-40982) | |
| 62-193, gnl|fr1|chrUn (303843757-303843610) | |
| 62-193, gnl|galGal2|chr8 (21828445-21828592) | |
| 62-193, gnl|hg17|chr1 (46448333-46448482) | |
| 62-193, gnl|Hg17|chr1 (46448348-46448479) | |
| 62-193, gnl|loxAfr1|scaffold_39768 (11784-11933) | |
| 62-193, gnl|mm7|chr4 (115478414-115478265) | |
| 62-193, gnl|Mm7|chr4 (115478397-115478266) | |
| 62-193, gnl|monDom2|scaffold_70 (6782662-6782516) | |
| 62-193, gnl|oryCun1|scaffold_212736 (4420-4271) | |
| 62-193, gnl|panTro1|chr1_random (67145958-67145809) | |
| 62-193, gnl|rheMac2|chr1 (49207021-49207170) | |
| 62-193, gnl|rn3|chr5 (136233330-136233479) | |
| 62-193, gnl|tetNig1|chrUn_random (107166931-107166784) | |
| 62-193, gnl|xenTro1|scaffold_3543 (1888-1741) | |
| 257-395, gnl|bosTau2|chr3 (67560409-67560547) | |
| 257-395, gnl|canFam2|chr15 (17122026-17121849) | |
| 257-395, gnl|danRer3|chr16 (12922307-12922167) | |
| 257-395, gnl|dasNov1|scaffold_5904 (6620-6798) | |
| 257-395, gnl|echTel1|scaffold_282681 (39792-39614) | |
| 257-395, gnl|fr1|chrUn (303843240-303843084) | |
| 257-395, gnl|galGal2|chr8 (21830904-21831051) | |
| 257-395, gnl|hg17|chr1 (46450356-46450533) | |
| 257-395, gnl|Hg17|chr1 (46450362-46450492) | |
| 257-395, gnl|loxAfr1|scaffold_39768 (13102-13280) | |
| 257-395, gnl|mm7|chr4 (115476852-115476672) | |
| 257-395, gnl|Mm7|chr4 (115476842-115476709) | |
| 257-395, gnl|monDom2|scaffold_70 (6781529-6781383) | |
| 257-395, gnl|panTro1|chr1_random (67143850-67143673) | |
| 257-395, gnl|rn3|chr5 (136235318-136235498) | |
| 257-395, gnl|tetNig1|chrUn_random (107166473-107166328) | |
| 257-395, gnl|xenTro1|scaffold_14 (2744273-2744131) | |
| 507-635, gnl|bosTau2|chr3 (67561311-67561439) | |
| 507-635, gnl|canFam2|chr15 (17121131-17120982) | |
| 507-635, gnl|danRer3|chr16 (12921077-12920932) | |
| 507-635, gnl|dasNov1|scaffold_5904 (7796-7944) | |
| 507-635, gnl|fr1|chrUn (303842725-303842581) | |
| 507-635, gnl|galGal2|chr8 (21831381-21831524) | |
| 507-635, gnl|hg17|chr1 (46451298-46451447) | |
| 507-635, gnl|Hg17|chr1 (46451314-46451442) | |
| 507-635, gnl|loxAfr1|scaffold_39768 (14040-14188) | |
| 507-635, gnl|mm7|chr4 (115475920-115475771) | |
| 507-635, gnl|Mm7|chr4 (115475902-115475774) | |
| 507-635, gnl|monDom2|scaffold_70 (6780240-6780085) | |
| 507-635, gnl|oryCun1|scaffold_212736 (1891-1742) | |
| 507-635, gnl|panTro1|chr1_random (67142855-67142706) | |
| 507-635, gnl|rn3|chr5 (136236229-136236378) | |
| 507-635, gnl|tetNig1|chrUn_random (107166024-107165897) | |
| 507-635, gnl|xenTro1|scaffold_14 (2743439-2743300) | |
| 745-928, gnl|bosTau2|chr22 (37578022-37578205) | |
| 745-928, gnl|canFam2|chr20 (40973797-40973572) | |
| 745-928, gnl|danRer3|chr6 (30743167-30743389) | |
| 745-928, gnl|dasNov1|scaffold_20361 (4454-4679) | |
| 745-928, gnl|echTel1|scaffold_266207 (15567-15342) | |
| 745-928, gnl|fr1|chrUn (196352639-196352856) | |
| 745-928, gnl|galGal2|chr12 (2353914-2353689) | |
| 745-928, gnl|hg17|chr3 (51654066-51654291) | |
| 745-928, gnl|Hg17|chr3 (51654081-51654264) | |
| 745-928, gnl|loxAfr1|scaffold_33435 (13094-12869) | |
| 745-928, gnl|mm7|chr9 (106433734-106433509) | |
| 745-928, gnl|Mm7|chr9 (106433717-106433534) | |
| 745-928, gnl|monDom2|scaffold_5 (71922283-71922058) | |
| 745-928, gnl|oryCun1|scaffold_206513 (73235-73010) | |
| 745-928, gnl|panTro1|chr2 (53254206-53254431) | |
| 745-928, gnl|rheMac2|chr2 (84790674-84790449) | |
| 745-928, gnl|rn3|chr8 (111916157-111915932) | |
| 745-928, gnl|tetNig1|chr9 (526017-526246) | |
| 745-928, gnl|xenTro1|scaffold_189 (963329-963549) |