Ss1.1-Pig4-TMW8004F13.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCCAGCCAGTTTGCACGGGTCCGGGGAGTTGGGGGCAGTCCACTTGCTGCCATGAATC CCAAGTTGCTGCAAGGGCGAGTTGGGCAGATGCTTCCCCCAGCACCAGGCTTCCGTGCCT TCTTTAGTGCTCCACCCCCCGCTACACCACCTCCTCCTCAGCAGCACCCCCCTGGCCCAG GGGGGGGCCTGCAAAACCTAAGATCTCAGGCCCCAATGTTTAGACCAGACACAACTCACC TTCATCCACAGCACCGTCGACTCTTACATCAGAGGCAGCAACAGAATAGAAATCAGCATC GCAGTCTCAATGGTGCAGGAGATAGAGGAAGTCACCGGAGCAGTCATCAAGATCACCTCC GAAAGGATCCATATGCCAATCTCATGTTACAGCGAGAGAAGGATTGGGTCTCCAAAATCC AGATGATGCAGCTGCAAAGCACTGACCCCTACCTGGATGATTTTTATTACCAGAATTACT TTGAAAAACTGGAGAAACTCTCAGCTGCTGAAGAAGTGCAAGGTGATGGCCCTAAAAAGG AGCGCACCAAGCTCATTACTCCTCAGGTGGCCAAGCTGGAGCATGCCTATAAGCCAGTGC AGTTTGAGGGCTCTTTGGGAAAGCTAACTGTCTCTAGTGTGAATAACCCTCGAAAAATGA TTGATGCTGTTGTGACATCTCGGAGTGAGGATGATGAGACAAAAGAAAAACAGGTTCGGG ACAAAAGACGAAAAACCCTTGTCATAATTGAGAAAACCTACAGTTTACTCCTTGATGTGG AGGATTATGAAAGGCGTTACCTCCTAAGTCTAGAAGAAGATAGACCTGCCCTGATGGATG AGAGAAAGCACAAAATTTGTAGCATGTATGACAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCCAGCCAGTTTGCACGGGTCCGGGGAGTTGGGGGCAGTCCACTTGCTGCCATGAATC CCAAGTTGCTGCAAGGGCGAGTTGGGCAGATGCTTCCCCCAGCACCAGGCTTCCGTGCCT TCTTTAGTGCTCCACCCCCCGCTACACCACCTCCTCCTCAGCAGCACCCCCCTGGCCCAG GGGGGGGCCTGCAAAACCTAAGATCTCAGGCCCCAATGTTTAGACCAGACACAACTCACC TTCATCCACAGCACCGTCGACTCTTACATCAGAGGCAGCAACAGAATAGAAATCAGCATC GCAGTCTCAATGGTGCAGGAGATAGAGGAAGTCACCGGAGCAGTCATCAAGATCACCTCC GAAAGGATCCATATGCCAATCTCATGTTACAGCGAGAGAAGGATTGGGTCTCCAAAATCC AGATGATGCAGCTGCAAAGCACTGACCCCTACCTGGATGATTTTTATTACCAGAATTACT TTGAAAAACTGGAGAAACTCTCAGCTGCTGAAGAAGTGCAAGGTGATGGCCCTAAAAAGG AGCGCACCAAGCTCATTACTCCTCAGGTGGCCAAGCTGGAGCATGCCTATAAGCCAGTGC AGTTTGAGGGCTCTTTGGGAAAGCTAACTGTCTCTAGTGTGAATAACCCTCGAAAAATGA TTGATGCTGTTGTGACATCTCGGAGTGAGGATGATGAGACAAAAGAAAAACAGGTTCGGG ACAAAAGACGAAAAACCCTTGTCATAATTGAGAAAACCTACAGTTTACTCCTTGATGTGG AGGATTATGAAAGGCGTTACCTCCTAAGTCTAGAAGAAGATAGACCTGCCCTGATGGATG AGAGAAAGCACAAAATTTGTAGCATGTATGACAACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 86 entry(ies) | More info |
| Aligned organism(s): 86 entry(ies) | Help | Less info |
| 1-202, gnl|bosTau2|chr15 (52899560-52899359) | |
| 1-202, gnl|Hg17|chr11 (59179770-59179572) | |
| 1-202, gnl|Mm7|chr19 (11603943-11604141) | |
| 293-473, gnl|bosTau2|chr15 (52895554-52895374) | |
| 293-473, gnl|canFam2|chr18 (40184353-40184239) | |
| 293-473, gnl|danRer3|chr1 (51747819-51747708) | |
| 293-473, gnl|dasNov1|scaffold_118832 (3366-3252) | |
| 293-473, gnl|echTel1|scaffold_293641 (49076-49187) | |
| 293-473, gnl|fr1|chrUn (218575180-218575066) | |
| 293-473, gnl|hg17|chr11 (59176884-59176998) | |
| 293-473, gnl|Hg17|chr11 (59177067-59176887) | |
| 293-473, gnl|loxAfr1|scaffold_78688 (12514-12405) | |
| 293-473, gnl|mm7|chr19 (11610183-11610069) | |
| 293-473, gnl|Mm7|chr19 (11609998-11610178) | |
| 293-473, gnl|monDom2|scaffold_33 (24014657-24014771) | |
| 293-473, gnl|oryCun1|scaffold_190836 (21130-21016) | |
| 293-473, gnl|panTro1|chr9 (60070675-60070789) | |
| 293-473, gnl|rheMac2|chr14 (14216891-14216777) | |
| 293-473, gnl|rn3|chr1 (214930233-214930120) | |
| 293-473, gnl|tetNig1|chrUn_random (112538694-112538580) | |
| 595-696, gnl|bosTau2|chr15 (52893992-52893891) | |
| 595-696, gnl|canFam2|chr18 (40185703-40185605) | |
| 595-696, gnl|canFam2|chr18 (40185768-40185562) | |
| 595-696, gnl|canFam2|chr18 (40185602-40185706) | |
| 595-696, gnl|danRer3|chr1 (51749035-51748935) | |
| 595-696, gnl|danRer3|chr1 (51749087-51748881) | |
| 595-696, gnl|danRer3|chr1 (51748934-51749035) | |
| 595-696, gnl|dasNov1|scaffold_118832 (4531-4337) | |
| 595-696, gnl|dasNov1|scaffold_454 (69663-69763) | |
| 595-696, gnl|dasNov1|scaffold_454 (69764-69660) | |
| 595-696, gnl|echTel1|scaffold_314321 (2079-1981) | |
| 595-696, gnl|echTel1|scaffold_314321 (2117-1935) | |
| 595-696, gnl|echTel1|scaffold_314321 (1979-2082) | |
| 595-696, gnl|fr1|chrUn (218575596-218575499) | |
| 595-696, gnl|fr1|chrUn (218575607-218575473) | |
| 595-696, gnl|hg17|chr11 (59175548-59175749) | |
| 595-696, gnl|Hg17|chr11 (59175693-59175592) | |
| 595-696, gnl|hg17|chr19 (45221653-45221753) | |
| 595-696, gnl|hg17|chr9 (128287720-128287827) | |
| 595-696, gnl|loxAfr1|scaffold_46415 (12505-12605) | |
| 595-696, gnl|loxAfr1|scaffold_46415 (12465-12651) | |
| 595-696, gnl|loxAfr1|scaffold_46415 (12604-12502) | |
| 595-696, gnl|mm7|chr19 (11612360-11612260) | |
| 595-696, gnl|mm7|chr19 (11612419-11612217) | |
| 595-696, gnl|mm7|chr19 (11612259-11612363) | |
| 595-696, gnl|Mm7|chr19 (11612258-11612359) | |
| 595-696, gnl|monDom2|scaffold_33 (24009011-24009200) | |
| 595-696, gnl|monDom2|scaffold_33 (24009157-24009057) | |
| 595-696, gnl|oryCun1|scaffold_190836 (22895-22795) | |
| 595-696, gnl|oryCun1|scaffold_190836 (22940-22747) | |
| 595-696, gnl|oryCun1|scaffold_190836 (22794-22898) | |
| 595-696, gnl|panTro1|chr11 (113120106-113120213) | |
| 595-696, gnl|panTro1|chr20 (42158051-42158151) | |
| 595-696, gnl|panTro1|chr9 (60069258-60069460) | |
| 595-696, gnl|rheMac2|chr14 (14218210-14218007) | |
| 595-696, gnl|rheMac2|chr15 (10422228-10422116) | |
| 595-696, gnl|rheMac2|chr19 (46424062-46424162) | |
| 595-696, gnl|rn3|chr1 (214932032-214931932) | |
| 595-696, gnl|rn3|chr1 (214932059-214931888) | |
| 595-696, gnl|rn3|chr1 (214931931-214932035) | |
| 595-696, gnl|tetNig1|chrUn_random (112539111-112539014) | |
| 595-696, gnl|tetNig1|chrUn_random (112539135-112539013) | |
| 595-696, gnl|tetNig1|chrUn_random (112539013-112539112) | |
| 756-876, gnl|bosTau2|chr15 (52892367-52892247) | |
| 756-876, gnl|canFam2|chr18 (40187639-40187515) | |
| 756-876, gnl|canFam2|chr18 (40187649-40187480) | |
| 756-876, gnl|dasNov1|scaffold_11432 (32318-32148) | |
| 756-876, gnl|dasNov1|scaffold_454 (69480-69604) | |
| 756-876, gnl|fr1|chrUn (218578345-218578166) | |
| 756-876, gnl|hg17|chr11 (59173527-59173698) | |
| 756-876, gnl|Hg17|chr11 (59173659-59173539) | |
| 756-876, gnl|hg17|chr19 (45221475-45221596) | |
| 756-876, gnl|loxAfr1|scaffold_46415 (10612-10736) | |
| 756-876, gnl|loxAfr1|scaffold_46415 (10602-10772) | |
| 756-876, gnl|mm7|chr19 (11615926-11615802) | |
| 756-876, gnl|mm7|chr19 (11615936-11615767) | |
| 756-876, gnl|Mm7|chr19 (11615802-11615922) | |
| 756-876, gnl|monDom2|scaffold_33 (24007782-24007958) | |
| 756-876, gnl|monDom2|scaffold_94 (1997655-1997767) | |
| 756-876, gnl|oryCun1|scaffold_190836 (25504-25323) | |
| 756-876, gnl|panTro1|chr20 (42157873-42157994) | |
| 756-876, gnl|panTro1|chr9 (60067242-60067413) | |
| 756-876, gnl|rheMac2|chr14 (14220789-14220618) | |
| 756-876, gnl|rheMac2|chr19 (46423882-46424003) | |
| 756-876, gnl|rn3|chr1 (214935556-214935432) | |
| 756-876, gnl|rn3|chr1 (214935566-214935389) |
| Aligned organism(s): 86 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-202, gnl|bosTau2|chr15 (52899560-52899359) | |
| 1-202, gnl|Hg17|chr11 (59179770-59179572) | |
| 1-202, gnl|Mm7|chr19 (11603943-11604141) | |
| 293-473, gnl|bosTau2|chr15 (52895554-52895374) | |
| 293-473, gnl|canFam2|chr18 (40184353-40184239) | |
| 293-473, gnl|danRer3|chr1 (51747819-51747708) | |
| 293-473, gnl|dasNov1|scaffold_118832 (3366-3252) | |
| 293-473, gnl|echTel1|scaffold_293641 (49076-49187) | |
| 293-473, gnl|fr1|chrUn (218575180-218575066) | |
| 293-473, gnl|hg17|chr11 (59176884-59176998) | |
| 293-473, gnl|Hg17|chr11 (59177067-59176887) | |
| 293-473, gnl|loxAfr1|scaffold_78688 (12514-12405) | |
| 293-473, gnl|mm7|chr19 (11610183-11610069) | |
| 293-473, gnl|Mm7|chr19 (11609998-11610178) | |
| 293-473, gnl|monDom2|scaffold_33 (24014657-24014771) | |
| 293-473, gnl|oryCun1|scaffold_190836 (21130-21016) | |
| 293-473, gnl|panTro1|chr9 (60070675-60070789) | |
| 293-473, gnl|rheMac2|chr14 (14216891-14216777) | |
| 293-473, gnl|rn3|chr1 (214930233-214930120) | |
| 293-473, gnl|tetNig1|chrUn_random (112538694-112538580) | |
| 595-696, gnl|bosTau2|chr15 (52893992-52893891) | |
| 595-696, gnl|canFam2|chr18 (40185703-40185605) | |
| 595-696, gnl|canFam2|chr18 (40185768-40185562) | |
| 595-696, gnl|canFam2|chr18 (40185602-40185706) | |
| 595-696, gnl|danRer3|chr1 (51749035-51748935) | |
| 595-696, gnl|danRer3|chr1 (51749087-51748881) | |
| 595-696, gnl|danRer3|chr1 (51748934-51749035) | |
| 595-696, gnl|dasNov1|scaffold_118832 (4531-4337) | |
| 595-696, gnl|dasNov1|scaffold_454 (69663-69763) | |
| 595-696, gnl|dasNov1|scaffold_454 (69764-69660) | |
| 595-696, gnl|echTel1|scaffold_314321 (2079-1981) | |
| 595-696, gnl|echTel1|scaffold_314321 (2117-1935) | |
| 595-696, gnl|echTel1|scaffold_314321 (1979-2082) | |
| 595-696, gnl|fr1|chrUn (218575596-218575499) | |
| 595-696, gnl|fr1|chrUn (218575607-218575473) | |
| 595-696, gnl|hg17|chr11 (59175548-59175749) | |
| 595-696, gnl|Hg17|chr11 (59175693-59175592) | |
| 595-696, gnl|hg17|chr19 (45221653-45221753) | |
| 595-696, gnl|hg17|chr9 (128287720-128287827) | |
| 595-696, gnl|loxAfr1|scaffold_46415 (12505-12605) | |
| 595-696, gnl|loxAfr1|scaffold_46415 (12465-12651) | |
| 595-696, gnl|loxAfr1|scaffold_46415 (12604-12502) | |
| 595-696, gnl|mm7|chr19 (11612360-11612260) | |
| 595-696, gnl|mm7|chr19 (11612419-11612217) | |
| 595-696, gnl|mm7|chr19 (11612259-11612363) | |
| 595-696, gnl|Mm7|chr19 (11612258-11612359) | |
| 595-696, gnl|monDom2|scaffold_33 (24009011-24009200) | |
| 595-696, gnl|monDom2|scaffold_33 (24009157-24009057) | |
| 595-696, gnl|oryCun1|scaffold_190836 (22895-22795) | |
| 595-696, gnl|oryCun1|scaffold_190836 (22940-22747) | |
| 595-696, gnl|oryCun1|scaffold_190836 (22794-22898) | |
| 595-696, gnl|panTro1|chr11 (113120106-113120213) | |
| 595-696, gnl|panTro1|chr20 (42158051-42158151) | |
| 595-696, gnl|panTro1|chr9 (60069258-60069460) | |
| 595-696, gnl|rheMac2|chr14 (14218210-14218007) | |
| 595-696, gnl|rheMac2|chr15 (10422228-10422116) | |
| 595-696, gnl|rheMac2|chr19 (46424062-46424162) | |
| 595-696, gnl|rn3|chr1 (214932032-214931932) | |
| 595-696, gnl|rn3|chr1 (214932059-214931888) | |
| 595-696, gnl|rn3|chr1 (214931931-214932035) | |
| 595-696, gnl|tetNig1|chrUn_random (112539111-112539014) | |
| 595-696, gnl|tetNig1|chrUn_random (112539135-112539013) | |
| 595-696, gnl|tetNig1|chrUn_random (112539013-112539112) | |
| 756-876, gnl|bosTau2|chr15 (52892367-52892247) | |
| 756-876, gnl|canFam2|chr18 (40187639-40187515) | |
| 756-876, gnl|canFam2|chr18 (40187649-40187480) | |
| 756-876, gnl|dasNov1|scaffold_11432 (32318-32148) | |
| 756-876, gnl|dasNov1|scaffold_454 (69480-69604) | |
| 756-876, gnl|fr1|chrUn (218578345-218578166) | |
| 756-876, gnl|hg17|chr11 (59173527-59173698) | |
| 756-876, gnl|Hg17|chr11 (59173659-59173539) | |
| 756-876, gnl|hg17|chr19 (45221475-45221596) | |
| 756-876, gnl|loxAfr1|scaffold_46415 (10612-10736) | |
| 756-876, gnl|loxAfr1|scaffold_46415 (10602-10772) | |
| 756-876, gnl|mm7|chr19 (11615926-11615802) | |
| 756-876, gnl|mm7|chr19 (11615936-11615767) | |
| 756-876, gnl|Mm7|chr19 (11615802-11615922) | |
| 756-876, gnl|monDom2|scaffold_33 (24007782-24007958) | |
| 756-876, gnl|monDom2|scaffold_94 (1997655-1997767) | |
| 756-876, gnl|oryCun1|scaffold_190836 (25504-25323) | |
| 756-876, gnl|panTro1|chr20 (42157873-42157994) | |
| 756-876, gnl|panTro1|chr9 (60067242-60067413) | |
| 756-876, gnl|rheMac2|chr14 (14220789-14220618) | |
| 756-876, gnl|rheMac2|chr19 (46423882-46424003) | |
| 756-876, gnl|rn3|chr1 (214935556-214935432) | |
| 756-876, gnl|rn3|chr1 (214935566-214935389) |