Ss1.1-Pig4-TMW8004G08.5
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ACTTTAAAAGATCACACACTACATTCCTACTTTAAG------------------------
------------------------------------------------------------
------------------------TTCCACATGCCTTGGGCACAGCACCCCCCTCCAAAA
AAAATTTCAGAGTACTTTACCATACGCAGATATTAGATATGATAGTGACAGGATTAAAGT
TGGTGGATTGAACATGTATTTATTTTTGCTTCCTCTCAAAACTCCACTGAAATCAAATGG
ATTAAAAAGAAAAGGTTATTAACCCACAAGAACCAAGTGAACAGTGGAGAGGATGGTAAC
TAGATTGGGTGCAACTTATAAAGTTGAATGGTTAACTAATTTATCAGATAGGAGGAAAAA
TTCTAAGCAGGATAGCAAACTTCTGTTTTCATAACAGGGCTTGTAGAACTAGCTGGCTGT
TTAAGCTTTATTTTTCAAATTTAAAAATAAAGTTTAAAATAAATCAGATGCAGCTACATG
CAACAGCATGGATTAATCTCACAAACATGATGTTGTGTATGTGAATTATACTTAATAAAA
CCTATCCTCCAAATAAAATACAAGTAATAACATTCTCCAGTTGCCATGTCAGTGCTCACT
GAGATGTCTCTAACAGCTCTACATGTGTTCGACTCCAGGGGAAAGAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACTTTAAAAGATCACACACTACATTCCTACTTTAAG------------------------
------------------------------------------------------------
------------------------TTCCACATGCCTTGGGCACAGCACCCCCCTCCAAAA
AAAATTTCAGAGTACTTTACCATACGCAGATATTAGATATGATAGTGACAGGATTAAAGT
TGGTGGATTGAACATGTATTTATTTTTGCTTCCTCTCAAAACTCCACTGAAATCAAATGG
ATTAAAAAGAAAAGGTTATTAACCCACAAGAACCAAGTGAACAGTGGAGAGGATGGTAAC
TAGATTGGGTGCAACTTATAAAGTTGAATGGTTAACTAATTTATCAGATAGGAGGAAAAA
TTCTAAGCAGGATAGCAAACTTCTGTTTTCATAACAGGGCTTGTAGAACTAGCTGGCTGT
TTAAGCTTTATTTTTCAAATTTAAAAATAAAGTTTAAAATAAATCAGATGCAGCTACATG
CAACAGCATGGATTAATCTCACAAACATGATGTTGTGTATGTGAATTATACTTAATAAAA
CCTATCCTCCAAATAAAATACAAGTAATAACATTCTCCAGTTGCCATGTCAGTGCTCACT
GAGATGTCTCTAACAGCTCTACATGTGTTCGACTCCAGGGGAAAGAAA
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72-286, gnl|bosTau2|chr11 (48130811-48130597) |
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72-286, gnl|dasNov1|scaffold_47595 (1738-1590) |
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72-286, gnl|echTel1|scaffold_288173 (44189-44024) |
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72-286, gnl|hg17|chr2 (68323120-68323288) |
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72-286, gnl|Hg17|chr2 (68323370-68323141) |
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72-286, gnl|loxAfr1|scaffold_16893 (13575-13414) |
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72-286, gnl|panTro1|chr12_random (25284646-25284813) |
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72-286, gnl|rheMac2|chr13 (68451783-68451955) |
| |
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310-470, gnl|bosTau2|chr11 (48128798-48128636) |
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310-470, gnl|canFam2|chr10 (70398736-70398963) |
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310-470, gnl|dasNov1|scaffold_47595 (7290-7053) |
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310-470, gnl|hg17|chr2 (68320835-68321075) |
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310-470, gnl|Hg17|chr2 (68321128-68320949) |
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310-470, gnl|loxAfr1|scaffold_16893 (15655-15380) |
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310-470, gnl|panTro1|chr12_random (25282353-25282592) |
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310-470, gnl|rheMac2|chr13 (68449508-68449751) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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72-286, gnl|bosTau2|chr11 (48130811-48130597) |
|
72-286, gnl|dasNov1|scaffold_47595 (1738-1590) |
|
72-286, gnl|echTel1|scaffold_288173 (44189-44024) |
|
72-286, gnl|hg17|chr2 (68323120-68323288) |
|
72-286, gnl|Hg17|chr2 (68323370-68323141) |
|
72-286, gnl|loxAfr1|scaffold_16893 (13575-13414) |
|
72-286, gnl|panTro1|chr12_random (25284646-25284813) |
|
72-286, gnl|rheMac2|chr13 (68451783-68451955) |
| |
|
310-470, gnl|bosTau2|chr11 (48128798-48128636) |
|
310-470, gnl|canFam2|chr10 (70398736-70398963) |
|
310-470, gnl|dasNov1|scaffold_47595 (7290-7053) |
|
310-470, gnl|hg17|chr2 (68320835-68321075) |
|
310-470, gnl|Hg17|chr2 (68321128-68320949) |
|
310-470, gnl|loxAfr1|scaffold_16893 (15655-15380) |
|
310-470, gnl|panTro1|chr12_random (25282353-25282592) |
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310-470, gnl|rheMac2|chr13 (68449508-68449751) |
