Ss1.1-Pig4-TMW8004N13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTAACACCTGGCCCCCATTGGGACGTTAACTTTGAGAAGGAAAAGAAGAGCAAAAGATGA TGATGTCGTAAGCCTTAGCAGCCTTGATCTGAAGGAGCCAAGCAATAAAAGAGTTCGACC TCTAGCCCGGGTCACATCCTTGGCAAATTTAATCTCTCCTGTAAGAAATGGAGCCGTCAG GCGCGTTGGTCAAACAATACAGTCATTCACCCTTCGTGGTGACAGCAGATCCCCAGCTTC TGCCCAGAAGTTTTCGAGCAGATCCACAGTGCCCACGCCTGCCAAAAGGCGAAGCAGTGC TCTGTGGTCCGAGATGTTAGACGTGGGCATGAAGGAGTCCTTAACGACCAGAGAAATCAA GCGTCAGGAGGCAATATATGAAATGTCCCGAGGTGAACAGGATTTAATTGAGGATCTCAA GCTTGCAAGAAAGGCCTACCACGACCCCATGTTAAAGCTGTCTATTATGTCTGAGGAGGA GCTCACGCATATATTTGGTGATCTGGATGCTTACATACCTCTGCACGAAGATTTGTTGGC AAGAATAGGAGAAGCAACCAAGCCTGGTGGGACAGTGGAGCACATTGGTCACATTCTTGT AAATTGGCTGCCGGGCCTGAACGCCTACCGAGGCTACTGCAGCAACCAGCTGGCAGCCAA AGCCCTCCTCGATCAAAAGAAACAGGACCCCAGAGTCCAAGACTTCCTCCAGCGATGCCT GGAGTCCCCCTTCAGCCGCAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTAACACCTGGCCCCCATTGGGACGTTAACTTTGAGAAGGAAAAGAAGAGCAAAAGATGA TGATGTCGTAAGCCTTAGCAGCCTTGATCTGAAGGAGCCAAGCAATAAAAGAGTTCGACC TCTAGCCCGGGTCACATCCTTGGCAAATTTAATCTCTCCTGTAAGAAATGGAGCCGTCAG GCGCGTTGGTCAAACAATACAGTCATTCACCCTTCGTGGTGACAGCAGATCCCCAGCTTC TGCCCAGAAGTTTTCGAGCAGATCCACAGTGCCCACGCCTGCCAAAAGGCGAAGCAGTGC TCTGTGGTCCGAGATGTTAGACGTGGGCATGAAGGAGTCCTTAACGACCAGAGAAATCAA GCGTCAGGAGGCAATATATGAAATGTCCCGAGGTGAACAGGATTTAATTGAGGATCTCAA GCTTGCAAGAAAGGCCTACCACGACCCCATGTTAAAGCTGTCTATTATGTCTGAGGAGGA GCTCACGCATATATTTGGTGATCTGGATGCTTACATACCTCTGCACGAAGATTTGTTGGC AAGAATAGGAGAAGCAACCAAGCCTGGTGGGACAGTGGAGCACATTGGTCACATTCTTGT AAATTGGCTGCCGGGCCTGAACGCCTACCGAGGCTACTGCAGCAACCAGCTGGCAGCCAA AGCCCTCCTCGATCAAAAGAAACAGGACCCCAGAGTCCAAGACTTCCTCCAGCGATGCCT GGAGTCCCCCTTCAGCCGCAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 86 entry(ies) | More info |
| Aligned organism(s): 86 entry(ies) | Help | Less info |
| 201-371, gnl|bosTau2|chr13 (29033505-29033675) | |
| 201-371, gnl|canFam2|chr2 (33299318-33299167) | |
| 201-371, gnl|dasNov1|scaffold_25546 (2957-3084) | |
| 201-371, gnl|echTel1|scaffold_269733 (4651-4521) | |
| 201-371, gnl|galGal2|chr14 (15020906-15020745) | |
| 201-371, gnl|Hg17|chr10 (5484319-5484489) | |
| 201-371, gnl|hg17|chr18 (47213915-47214060) | |
| 201-371, gnl|loxAfr1|scaffold_69029 (2219-2058) | |
| 201-371, gnl|mm7|chr13 (105439933-105439773) | |
| 201-371, gnl|Mm7|chr13 (3772893-3772723) | |
| 201-371, gnl|monDom2|scaffold_13 (32277773-32277920) | |
| 201-371, gnl|oryCun1|scaffold_174374 (3445-3595) | |
| 201-371, gnl|panTro1|chr17 (43800023-43800168) | |
| 201-371, gnl|rheMac2|chr18 (44533393-44533538) | |
| 201-371, gnl|rn3|chr18 (70220352-70220230) | |
| 201-371, gnl|xenTro1|scaffold_20 (610866-610717) | |
| 432-538, gnl|bosTau2|chr13 (29034427-29034533) | |
| 432-538, gnl|canFam2|chr2 (33298186-33298090) | |
| 432-538, gnl|canFam2|chr2 (33298187-33298088) | |
| 432-538, gnl|danRer3|chr4 (7732607-7732703) | |
| 432-538, gnl|danRer3|chr4 (7732606-7732705) | |
| 432-538, gnl|dasNov1|scaffold_12151 (6972-6873) | |
| 432-538, gnl|dasNov1|scaffold_25546 (3748-3844) | |
| 432-538, gnl|echTel1|scaffold_269733 (4457-4361) | |
| 432-538, gnl|echTel1|scaffold_287942 (38563-38462) | |
| 432-538, gnl|fr1|chrUn (135486851-135486755) | |
| 432-538, gnl|fr1|chrUn (255299958-255300057) | |
| 432-538, gnl|galGal2|chr14 (15019476-15019380) | |
| 432-538, gnl|galGal2|chr14 (15019477-15019378) | |
| 432-538, gnl|hg17|chr10 (5485211-5485310) | |
| 432-538, gnl|Hg17|chr10 (5485211-5485317) | |
| 432-538, gnl|hg17|chr18 (47214128-47214224) | |
| 432-538, gnl|loxAfr1|scaffold_5337 (88150-88054) | |
| 432-538, gnl|loxAfr1|scaffold_5337 (88151-88052) | |
| 432-538, gnl|mm7|chr13 (105439707-105439611) | |
| 432-538, gnl|mm7|chr13 (3772040-3771941) | |
| 432-538, gnl|Mm7|chr13 (3772038-3771932) | |
| 432-538, gnl|monDom2|scaffold_13 (32277985-32278081) | |
| 432-538, gnl|monDom2|scaffold_31 (28563160-28563258) | |
| 432-538, gnl|oryCun1|scaffold_173345 (46211-46112) | |
| 432-538, gnl|oryCun1|scaffold_174374 (3662-3752) | |
| 432-538, gnl|panTro1|chr17 (43800236-43800332) | |
| 432-538, gnl|panTro1|chr8 (5619520-5619619) | |
| 432-538, gnl|rheMac2|chr18 (44533606-44533702) | |
| 432-538, gnl|rheMac2|chr18 (44533606-44533704) | |
| 432-538, gnl|rn3|chr17 (77549351-77549450) | |
| 432-538, gnl|rn3|chr18 (70220179-70220099) | |
| 432-538, gnl|tetNig1|chrUn_random (48780862-48780958) | |
| 432-538, gnl|tetNig1|chrUn_random (48780861-48780960) | |
| 432-538, gnl|xenTro1|scaffold_20 (609613-609517) | |
| 432-538, gnl|xenTro1|scaffold_20 (609613-609515) | |
| 604-742, gnl|bosTau2|chr13 (29035517-29035655) | |
| 604-742, gnl|canFam2|chr2 (33296965-33296706) | |
| 604-742, gnl|canFam2|chr2 (33296982-33296701) | |
| 604-742, gnl|danRer3|chr4 (7732956-7733245) | |
| 604-742, gnl|danRer3|chr4 (7732939-7733219) | |
| 604-742, gnl|dasNov1|scaffold_12151 (5969-5688) | |
| 604-742, gnl|dasNov1|scaffold_25546 (3923-4162) | |
| 604-742, gnl|echTel1|scaffold_269733 (4302-4122) | |
| 604-742, gnl|echTel1|scaffold_287942 (37550-37269) | |
| 604-742, gnl|fr1|chrUn (135486503-135486143) | |
| 604-742, gnl|fr1|chrUn (255300233-255300501) | |
| 604-742, gnl|galGal2|chr14 (15018679-15018420) | |
| 604-742, gnl|galGal2|chr14 (15018694-15018415) | |
| 604-742, gnl|hg17|chr10 (5486211-5486492) | |
| 604-742, gnl|Hg17|chr10 (5486224-5486362) | |
| 604-742, gnl|hg17|chr18 (47214303-47214559) | |
| 604-742, gnl|loxAfr1|scaffold_9438 (89831-90085) | |
| 604-742, gnl|loxAfr1|scaffold_9438 (89811-90090) | |
| 604-742, gnl|mm7|chr13 (105439532-105439274) | |
| 604-742, gnl|mm7|chr13 (3771179-3770902) | |
| 604-742, gnl|Mm7|chr13 (3771168-3771030) | |
| 604-742, gnl|monDom2|scaffold_13 (32278160-32278419) | |
| 604-742, gnl|monDom2|scaffold_31 (28563761-28564042) | |
| 604-742, gnl|oryCun1|scaffold_173345 (45248-44971) | |
| 604-742, gnl|oryCun1|scaffold_174374 (3831-4084) | |
| 604-742, gnl|panTro1|chr17 (43800411-43800668) | |
| 604-742, gnl|panTro1|chr8 (5620518-5620799) | |
| 604-742, gnl|rheMac2|chr18 (44533781-44534038) | |
| 604-742, gnl|rheMac2|chr9 (5733324-5733605) | |
| 604-742, gnl|rn3|chr17 (77550205-77550482) | |
| 604-742, gnl|rn3|chr18 (70220012-70219745) | |
| 604-742, gnl|tetNig1|chrUn_random (48781117-48781392) | |
| 604-742, gnl|tetNig1|chrUn_random (48781115-48781380) | |
| 604-742, gnl|xenTro1|scaffold_20 (608666-608407) | |
| 604-742, gnl|xenTro1|scaffold_20 (608683-608402) |
| Aligned organism(s): 86 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 201-371, gnl|bosTau2|chr13 (29033505-29033675) | |
| 201-371, gnl|canFam2|chr2 (33299318-33299167) | |
| 201-371, gnl|dasNov1|scaffold_25546 (2957-3084) | |
| 201-371, gnl|echTel1|scaffold_269733 (4651-4521) | |
| 201-371, gnl|galGal2|chr14 (15020906-15020745) | |
| 201-371, gnl|Hg17|chr10 (5484319-5484489) | |
| 201-371, gnl|hg17|chr18 (47213915-47214060) | |
| 201-371, gnl|loxAfr1|scaffold_69029 (2219-2058) | |
| 201-371, gnl|mm7|chr13 (105439933-105439773) | |
| 201-371, gnl|Mm7|chr13 (3772893-3772723) | |
| 201-371, gnl|monDom2|scaffold_13 (32277773-32277920) | |
| 201-371, gnl|oryCun1|scaffold_174374 (3445-3595) | |
| 201-371, gnl|panTro1|chr17 (43800023-43800168) | |
| 201-371, gnl|rheMac2|chr18 (44533393-44533538) | |
| 201-371, gnl|rn3|chr18 (70220352-70220230) | |
| 201-371, gnl|xenTro1|scaffold_20 (610866-610717) | |
| 432-538, gnl|bosTau2|chr13 (29034427-29034533) | |
| 432-538, gnl|canFam2|chr2 (33298186-33298090) | |
| 432-538, gnl|canFam2|chr2 (33298187-33298088) | |
| 432-538, gnl|danRer3|chr4 (7732607-7732703) | |
| 432-538, gnl|danRer3|chr4 (7732606-7732705) | |
| 432-538, gnl|dasNov1|scaffold_12151 (6972-6873) | |
| 432-538, gnl|dasNov1|scaffold_25546 (3748-3844) | |
| 432-538, gnl|echTel1|scaffold_269733 (4457-4361) | |
| 432-538, gnl|echTel1|scaffold_287942 (38563-38462) | |
| 432-538, gnl|fr1|chrUn (135486851-135486755) | |
| 432-538, gnl|fr1|chrUn (255299958-255300057) | |
| 432-538, gnl|galGal2|chr14 (15019476-15019380) | |
| 432-538, gnl|galGal2|chr14 (15019477-15019378) | |
| 432-538, gnl|hg17|chr10 (5485211-5485310) | |
| 432-538, gnl|Hg17|chr10 (5485211-5485317) | |
| 432-538, gnl|hg17|chr18 (47214128-47214224) | |
| 432-538, gnl|loxAfr1|scaffold_5337 (88150-88054) | |
| 432-538, gnl|loxAfr1|scaffold_5337 (88151-88052) | |
| 432-538, gnl|mm7|chr13 (105439707-105439611) | |
| 432-538, gnl|mm7|chr13 (3772040-3771941) | |
| 432-538, gnl|Mm7|chr13 (3772038-3771932) | |
| 432-538, gnl|monDom2|scaffold_13 (32277985-32278081) | |
| 432-538, gnl|monDom2|scaffold_31 (28563160-28563258) | |
| 432-538, gnl|oryCun1|scaffold_173345 (46211-46112) | |
| 432-538, gnl|oryCun1|scaffold_174374 (3662-3752) | |
| 432-538, gnl|panTro1|chr17 (43800236-43800332) | |
| 432-538, gnl|panTro1|chr8 (5619520-5619619) | |
| 432-538, gnl|rheMac2|chr18 (44533606-44533702) | |
| 432-538, gnl|rheMac2|chr18 (44533606-44533704) | |
| 432-538, gnl|rn3|chr17 (77549351-77549450) | |
| 432-538, gnl|rn3|chr18 (70220179-70220099) | |
| 432-538, gnl|tetNig1|chrUn_random (48780862-48780958) | |
| 432-538, gnl|tetNig1|chrUn_random (48780861-48780960) | |
| 432-538, gnl|xenTro1|scaffold_20 (609613-609517) | |
| 432-538, gnl|xenTro1|scaffold_20 (609613-609515) | |
| 604-742, gnl|bosTau2|chr13 (29035517-29035655) | |
| 604-742, gnl|canFam2|chr2 (33296965-33296706) | |
| 604-742, gnl|canFam2|chr2 (33296982-33296701) | |
| 604-742, gnl|danRer3|chr4 (7732956-7733245) | |
| 604-742, gnl|danRer3|chr4 (7732939-7733219) | |
| 604-742, gnl|dasNov1|scaffold_12151 (5969-5688) | |
| 604-742, gnl|dasNov1|scaffold_25546 (3923-4162) | |
| 604-742, gnl|echTel1|scaffold_269733 (4302-4122) | |
| 604-742, gnl|echTel1|scaffold_287942 (37550-37269) | |
| 604-742, gnl|fr1|chrUn (135486503-135486143) | |
| 604-742, gnl|fr1|chrUn (255300233-255300501) | |
| 604-742, gnl|galGal2|chr14 (15018679-15018420) | |
| 604-742, gnl|galGal2|chr14 (15018694-15018415) | |
| 604-742, gnl|hg17|chr10 (5486211-5486492) | |
| 604-742, gnl|Hg17|chr10 (5486224-5486362) | |
| 604-742, gnl|hg17|chr18 (47214303-47214559) | |
| 604-742, gnl|loxAfr1|scaffold_9438 (89831-90085) | |
| 604-742, gnl|loxAfr1|scaffold_9438 (89811-90090) | |
| 604-742, gnl|mm7|chr13 (105439532-105439274) | |
| 604-742, gnl|mm7|chr13 (3771179-3770902) | |
| 604-742, gnl|Mm7|chr13 (3771168-3771030) | |
| 604-742, gnl|monDom2|scaffold_13 (32278160-32278419) | |
| 604-742, gnl|monDom2|scaffold_31 (28563761-28564042) | |
| 604-742, gnl|oryCun1|scaffold_173345 (45248-44971) | |
| 604-742, gnl|oryCun1|scaffold_174374 (3831-4084) | |
| 604-742, gnl|panTro1|chr17 (43800411-43800668) | |
| 604-742, gnl|panTro1|chr8 (5620518-5620799) | |
| 604-742, gnl|rheMac2|chr18 (44533781-44534038) | |
| 604-742, gnl|rheMac2|chr9 (5733324-5733605) | |
| 604-742, gnl|rn3|chr17 (77550205-77550482) | |
| 604-742, gnl|rn3|chr18 (70220012-70219745) | |
| 604-742, gnl|tetNig1|chrUn_random (48781117-48781392) | |
| 604-742, gnl|tetNig1|chrUn_random (48781115-48781380) | |
| 604-742, gnl|xenTro1|scaffold_20 (608666-608407) | |
| 604-742, gnl|xenTro1|scaffold_20 (608683-608402) |