Non-Coding RNA Search

Ss1.1-Pig4-TMW8005J10.3

Sequence:


               
               CCCTTGCACACCTCCCCACAAATCCCCTAACATCCCCCAGCTTGAGTCCCATAGGCAGTG
TCCATGGGTAGGGTTGGCACCAACCAGCCAAGGAGAATGAGAGGCACTGCCCACACCCCA
GAAACATCACTGAAGCCTGGGGATTCAGGTCAGGAGAACAGCCAGAACCCAGGACCCAAG
GGTGCACCTGACACATCACCCTGGAAATTGCAGTAAAACTTTCTAAGAATGAGAAAATCC
TGAAAAAGCTCTAACAAAGAAACTCAAAGTATGGAAGGCAGGAGAAACAGGTATGAATTT
TGGTTCCCATATGCCCAGGTTATGCGAAATCACTTATTTTAAAAAGATGTTTTTGTTGTT
GGTTTTTTGGTTTTGTTTTTGTTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTTTTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTTGCACACCTCCCCACAAATCCCCTAACATCCCCCAGCTTGAGTCCCATAGGCAGTG
TCCATGGGTAGGGTTGGCACCAACCAGCCAAGGAGAATGAGAGGCACTGCCCACACCCCA
GAAACATCACTGAAGCCTGGGGATTCAGGTCAGGAGAACAGCCAGAACCCAGGACCCAAG
GGTGCACCTGACACATCACCCTGGAAATTGCAGTAAAACTTTCTAAGAATGAGAAAATCC
TGAAAAAGCTCTAACAAAGAAACTCAAAGTATGGAAGGCAGGAGAAACAGGTATGAATTT
TGGTTCCCATATGCCCAGGTTATGCGAAATCACTTATTTTAAAAAGATGTTTTTGTTGTT
GGTTTTTTGGTTTTGTTTTTGTTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTTTTGCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               47-153, + strand, RNAz p=0.576344

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               47-153, + strand, RNAz p=0.576344

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               9-345, gnl|bosTau2|chr21 (23939102-23939442)
               

               
               9-345, gnl|Hg17|chr15 (72036326-72036666)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-345, gnl|bosTau2|chr21 (23939102-23939442)
               

               
               9-345, gnl|Hg17|chr15 (72036326-72036666)

	9-345, gnl\|bosTau2\|chr21 (23939102-23939442)
	9-345, gnl\|Hg17\|chr15 (72036326-72036666)