Ss1.1-Pig4-TMW8008H20.5
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GTGAAAGGCTGATAGTTCATCTAATTATCTGAGCTAATCTGTGATATTTGTGAGCAGTTT
CTGAGTTAGAAAAGACTACAGGAAGGAGTGACAAAGCCAAAGGATCAGAATTGTCCTTGG
GGCCACACTGCCTCACTTTAAAGGAAAACTATGGTTCCTAGACACTTTGAGTTTAGCGAT
TAAACAGAGACATAAACCAAATGTTTCCAACATCTCAAGCATGCGAACTTCTCCTTTCTT
TTTCTTTTCTCTTTTTTTCAATAAACATTTGTATTAGGAAAAGGGAAGAATAGGAAATAC
ATAGCAGTTCCTAACCAAGCTGGGCAGACTTATGAAAGTTGTCGATCCTGGTTCTAGGGG
AAATTCATTGACTAAGCCCAGATGTTACTATTGGAGAAAGATTCTTTTGTCCATTGTCTT
CTGTGGCCCATGGAAGAGACTTCCTTTTCCACCATCCTTCTTAGCGTGGCTGAAGTTGGC
AATGGAGAACGTGTCTTCCTTTCATAACAGACTTCTCAGCACATTTCCCGTACTGAAGGT
TTAGTTCCCAGGCTAGGGAGCGAATCAGAGCTGTAGCCACTGGCCTACACCAGAGCCACA
GCAACGCGGGATCCGAGCCGCGTCTGCAACCTAAACCACAGCTCATGGCAACGCCGTATC
GTTAACCCACTGAGCAAGCACAGGGACCGAACCCGCAACCTCATGGTTCCTAGTCGGATT
CGTTGACCACTGCACCATGACGGAAACTCCCCAAAGGCTTTTTAAAGTCTGGGCCGATGA
CTTCTGTAGCAATGCTTATACCTCACAATGGCTTCCAGTTAGTTCCATAGGGTGAGCCTC
TCCGAATTCTTTTTGAAACATAAAGAACTCCTTTTTAAAGAGAAGATAATTGGAAGGAGT
CACTCATGTGACAGTAACTGGAGTTTTTCTGACCGAAAAATTGCAGAATGACCAAAAGCT
ATTATGAATTTTCAATGATTTTAAATTGGCATGTATTTTATTTTTCGCAATAGCATGTAC
AGACATCTGAAAAACTGTAGCAGTATATACACGTTGTAGGGATTCCTGGACACCGTATTC
CAACACCTTCCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GTGAAAGGCTGATAGTTCATCTAATTATCTGAGCTAATCTGTGATATTTGTGAGCAGTTT
CTGAGTTAGAAAAGACTACAGGAAGGAGTGACAAAGCCAAAGGATCAGAATTGTCCTTGG
GGCCACACTGCCTCACTTTAAAGGAAAACTATGGTTCCTAGACACTTTGAGTTTAGCGAT
TAAACAGAGACATAAACCAAATGTTTCCAACATCTCAAGCATGCGAACTTCTCCTTTCTT
TTTCTTTTCTCTTTTTTTCAATAAACATTTGTATTAGGAAAAGGGAAGAATAGGAAATAC
ATAGCAGTTCCTAACCAAGCTGGGCAGACTTATGAAAGTTGTCGATCCTGGTTCTAGGGG
AAATTCATTGACTAAGCCCAGATGTTACTATTGGAGAAAGATTCTTTTGTCCATTGTCTT
CTGTGGCCCATGGAAGAGACTTCCTTTTCCACCATCCTTCTTAGCGTGGCTGAAGTTGGC
AATGGAGAACGTGTCTTCCTTTCATAACAGACTTCTCAGCACATTTCCCGTACTGAAGGT
TTAGTTCCCAGGCTAGGGAGCGAATCAGAGCTGTAGCCACTGGCCTACACCAGAGCCACA
GCAACGCGGGATCCGAGCCGCGTCTGCAACCTAAACCACAGCTCATGGCAACGCCGTATC
GTTAACCCACTGAGCAAGCACAGGGACCGAACCCGCAACCTCATGGTTCCTAGTCGGATT
CGTTGACCACTGCACCATGACGGAAACTCCCCAAAGGCTTTTTAAAGTCTGGGCCGATGA
CTTCTGTAGCAATGCTTATACCTCACAATGGCTTCCAGTTAGTTCCATAGGGTGAGCCTC
TCCGAATTCTTTTTGAAACATAAAGAACTCCTTTTTAAAGAGAAGATAATTGGAAGGAGT
CACTCATGTGACAGTAACTGGAGTTTTTCTGACCGAAAAATTGCAGAATGACCAAAAGCT
ATTATGAATTTTCAATGATTTTAAATTGGCATGTATTTTATTTTTCGCAATAGCATGTAC
AGACATCTGAAAAACTGTAGCAGTATATACACGTTGTAGGGATTCCTGGACACCGTATTC
CAACACCTTCCC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1-515, gnl|bosTau2|chr1 (41832435-41832958) |
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1-515, gnl|Hg17|chr3 (124703574-124703044) |
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1-515, gnl|Mm7|chr16 (34775285-34775878) |
| |
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751-1056, gnl|bosTau2|chr1 (41833007-41833322) |
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751-1056, gnl|canFam2|chr33 (29581302-29581708) |
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751-1056, gnl|dasNov1|scaffold_13292 (80875-80672) |
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751-1056, gnl|echTel1|scaffold_232478 (8155-8438) |
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751-1056, gnl|hg17|chr3 (124702545-124702914) |
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751-1056, gnl|Hg17|chr3 (124702995-124702690) |
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751-1056, gnl|loxAfr1|scaffold_6068 (387-757) |
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751-1056, gnl|mm7|chr16 (34776478-34776154) |
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751-1056, gnl|panTro1|chr2 (126403421-126403790) |
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751-1056, gnl|rheMac2|chr2 (43492819-43493187) |
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751-1056, gnl|rn3|chr11 (67552311-67552629) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-515, gnl|bosTau2|chr1 (41832435-41832958) |
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1-515, gnl|Hg17|chr3 (124703574-124703044) |
|
1-515, gnl|Mm7|chr16 (34775285-34775878) |
| |
|
751-1056, gnl|bosTau2|chr1 (41833007-41833322) |
|
751-1056, gnl|canFam2|chr33 (29581302-29581708) |
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751-1056, gnl|dasNov1|scaffold_13292 (80875-80672) |
|
751-1056, gnl|echTel1|scaffold_232478 (8155-8438) |
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751-1056, gnl|hg17|chr3 (124702545-124702914) |
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751-1056, gnl|Hg17|chr3 (124702995-124702690) |
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751-1056, gnl|loxAfr1|scaffold_6068 (387-757) |
|
751-1056, gnl|mm7|chr16 (34776478-34776154) |
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751-1056, gnl|panTro1|chr2 (126403421-126403790) |
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751-1056, gnl|rheMac2|chr2 (43492819-43493187) |
|
751-1056, gnl|rn3|chr11 (67552311-67552629) |
