Ss1.1-Pig4-TMW8011I17.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGTAGAGCAGGGCCGTCCGCAGCCATGTCGGCCAAGGCGATTTCGGAGCAGACGGGCAA AGAACTCCTGTACAAGTACATCTGCACCACCTCGGCCATCCAGAACCGGTTCAAGTATGC CCGGGTCACCCCTGACACGGACTGGGCCCGCCTGCTGCAGGACCACCCTTGGCTGCTCAG TGAGAGCCTGGTAGTCAAGCCAGACCAGCTGATCAAACGGCGTGGAAAGCTGGGCCTCGT CGGGGTCAACCTCACCCTGGATGGAGTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGA GGCCACAGTTGGCAAGGCCAGAGGCTTCCTCAAGAACTTTCTGATTGAACCCTTCGTCCC TCACAGTCAGGAGGAGGAGTTCTATGTCTGCATCTACGCTGCCCGAGACGGGGACCACGT GCTGTTCCACCATGAGGGTGGGGTGGACGTGGGTGACGTGGACGCCAAAGCCCAGAGACT GCTCGTCGGCGTGGACGAGAAGCTGAATCCTGAGGCCATCAAGAAACACCTGTTGGTCCA TGCCCCCGAAGACAAGAAAGAAATTCCGGCCAGCTTTATCTCCGGCCTCTTCAATTTCTA TGAGGATCTGTACTTCACCTACCTCGAGATCAACCCTCTTGTAGTGACCAAAGACGGCGT CTACGTCCTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGTAGAGCAGGGCCGTCCGCAGCCATGTCGGCCAAGGCGATTTCGGAGCAGACGGGCAA AGAACTCCTGTACAAGTACATCTGCACCACCTCGGCCATCCAGAACCGGTTCAAGTATGC CCGGGTCACCCCTGACACGGACTGGGCCCGCCTGCTGCAGGACCACCCTTGGCTGCTCAG TGAGAGCCTGGTAGTCAAGCCAGACCAGCTGATCAAACGGCGTGGAAAGCTGGGCCTCGT CGGGGTCAACCTCACCCTGGATGGAGTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGA GGCCACAGTTGGCAAGGCCAGAGGCTTCCTCAAGAACTTTCTGATTGAACCCTTCGTCCC TCACAGTCAGGAGGAGGAGTTCTATGTCTGCATCTACGCTGCCCGAGACGGGGACCACGT GCTGTTCCACCATGAGGGTGGGGTGGACGTGGGTGACGTGGACGCCAAAGCCCAGAGACT GCTCGTCGGCGTGGACGAGAAGCTGAATCCTGAGGCCATCAAGAAACACCTGTTGGTCCA TGCCCCCGAAGACAAGAAAGAAATTCCGGCCAGCTTTATCTCCGGCCTCTTCAATTTCTA TGAGGATCTGTACTTCACCTACCTCGAGATCAACCCTCTTGTAGTGACCAAAGACGGCGT CTACGTCCTGGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 376-495, + strand, RNAz p=0.556757 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 376-495, + strand, RNAz p=0.556757 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC006195, + |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 1-180, gnl|bosTau2|chr23 (68831-69010) | |
| 1-180, gnl|canFam2|chr9 (24251375-24251205) | |
| 1-180, gnl|danRer3|chr3 (5998249-5998091) | |
| 1-180, gnl|dasNov1|scaffold_2391 (36084-35914) | |
| 1-180, gnl|echTel1|scaffold_249527 (399-229) | |
| 1-180, gnl|fr1|chrUn (96672477-96672649) | |
| 1-180, gnl|galGal2|chr27_random (446994-446826) | |
| 1-180, gnl|hg17|chr17 (37323496-37323666) | |
| 1-180, gnl|Hg17|chr17 (37323677-37323498) | |
| 1-180, gnl|loxAfr1|scaffold_14304 (33449-33619) | |
| 1-180, gnl|mm7|chr11 (100632481-100632651) | |
| 1-180, gnl|Mm7|chr11 (100632662-100632483) | |
| 1-180, gnl|monDom2|scaffold_18 (52198876-52199046) | |
| 1-180, gnl|panTro1|chr19 (40523876-40524046) | |
| 1-180, gnl|rheMac2|chr16 (52015437-52015607) | |
| 1-180, gnl|rn3|chr10 (89481338-89481508) | |
| 1-180, gnl|tetNig1|chrUn_random (131070984-131070822) | |
| 1-180, gnl|xenTro1|scaffold_394 (818930-819088) | |
| 183-309, gnl|bosTau2|chr23 (70201-70327) | |
| 183-309, gnl|canFam2|chr9 (24252645-24252499) | |
| 183-309, gnl|danRer3|chr3 (6001843-6001705) | |
| 183-309, gnl|dasNov1|scaffold_2391 (37446-37300) | |
| 183-309, gnl|echTel1|scaffold_294080 (3558-3703) | |
| 183-309, gnl|fr1|chrUn (96671366-96671504) | |
| 183-309, gnl|galGal2|chr27_random (448012-447861) | |
| 183-309, gnl|hg17|chr17 (37322192-37322336) | |
| 183-309, gnl|Hg17|chr17 (37322323-37322197) | |
| 183-309, gnl|loxAfr1|scaffold_14304 (32155-32301) | |
| 183-309, gnl|mm7|chr11 (100631012-100631158) | |
| 183-309, gnl|Mm7|chr11 (100631145-100631019) | |
| 183-309, gnl|monDom2|scaffold_18 (52197836-52197980) | |
| 183-309, gnl|oryCun1|scaffold_203960 (45875-45733) | |
| 183-309, gnl|panTro1|chr19 (40522572-40522716) | |
| 183-309, gnl|rheMac2|chr16 (52014155-52014299) | |
| 183-309, gnl|rn3|chr10 (89480076-89480222) | |
| 183-309, gnl|tetNig1|chr2_random (35571-35712) | |
| 183-309, gnl|xenTro1|scaffold_394 (818218-818357) | |
| 351-561, gnl|bosTau2|chr23 (72652-72859) | |
| 351-561, gnl|Hg17|chr17 (37319551-37319289) | |
| 351-561, gnl|Mm7|chr11 (100628861-100628654) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-180, gnl|bosTau2|chr23 (68831-69010) | |
| 1-180, gnl|canFam2|chr9 (24251375-24251205) | |
| 1-180, gnl|danRer3|chr3 (5998249-5998091) | |
| 1-180, gnl|dasNov1|scaffold_2391 (36084-35914) | |
| 1-180, gnl|echTel1|scaffold_249527 (399-229) | |
| 1-180, gnl|fr1|chrUn (96672477-96672649) | |
| 1-180, gnl|galGal2|chr27_random (446994-446826) | |
| 1-180, gnl|hg17|chr17 (37323496-37323666) | |
| 1-180, gnl|Hg17|chr17 (37323677-37323498) | |
| 1-180, gnl|loxAfr1|scaffold_14304 (33449-33619) | |
| 1-180, gnl|mm7|chr11 (100632481-100632651) | |
| 1-180, gnl|Mm7|chr11 (100632662-100632483) | |
| 1-180, gnl|monDom2|scaffold_18 (52198876-52199046) | |
| 1-180, gnl|panTro1|chr19 (40523876-40524046) | |
| 1-180, gnl|rheMac2|chr16 (52015437-52015607) | |
| 1-180, gnl|rn3|chr10 (89481338-89481508) | |
| 1-180, gnl|tetNig1|chrUn_random (131070984-131070822) | |
| 1-180, gnl|xenTro1|scaffold_394 (818930-819088) | |
| 183-309, gnl|bosTau2|chr23 (70201-70327) | |
| 183-309, gnl|canFam2|chr9 (24252645-24252499) | |
| 183-309, gnl|danRer3|chr3 (6001843-6001705) | |
| 183-309, gnl|dasNov1|scaffold_2391 (37446-37300) | |
| 183-309, gnl|echTel1|scaffold_294080 (3558-3703) | |
| 183-309, gnl|fr1|chrUn (96671366-96671504) | |
| 183-309, gnl|galGal2|chr27_random (448012-447861) | |
| 183-309, gnl|hg17|chr17 (37322192-37322336) | |
| 183-309, gnl|Hg17|chr17 (37322323-37322197) | |
| 183-309, gnl|loxAfr1|scaffold_14304 (32155-32301) | |
| 183-309, gnl|mm7|chr11 (100631012-100631158) | |
| 183-309, gnl|Mm7|chr11 (100631145-100631019) | |
| 183-309, gnl|monDom2|scaffold_18 (52197836-52197980) | |
| 183-309, gnl|oryCun1|scaffold_203960 (45875-45733) | |
| 183-309, gnl|panTro1|chr19 (40522572-40522716) | |
| 183-309, gnl|rheMac2|chr16 (52014155-52014299) | |
| 183-309, gnl|rn3|chr10 (89480076-89480222) | |
| 183-309, gnl|tetNig1|chr2_random (35571-35712) | |
| 183-309, gnl|xenTro1|scaffold_394 (818218-818357) | |
| 351-561, gnl|bosTau2|chr23 (72652-72859) | |
| 351-561, gnl|Hg17|chr17 (37319551-37319289) | |
| 351-561, gnl|Mm7|chr11 (100628861-100628654) |