Non-Coding RNA Search

Ss1.1-Pig4-TMW8012B03.3

Sequence:


               
               AAGTTCTCCGCAAACGGCGGCCAACTCCGCGGCAGAGCTGCTGAAGCAGGGGGCAGCCTG
CAACGTGTGGTACCTCAACTCCGTGGAGATGGAGTCTCTCACGGGCCCCCAGGCCGTGCA
GAAGGCACTGAGCATCACCCTGGTCCAAGAGCCGCCCCCTCTGTGCACGGTCGTGCACTT
CAAGGTGTCAGCCCAGGGCATCACCCTGACGGACAACCAGAGGAAGCTCTTCTTCCGGAG
ACACTACCCCGTGAGCAGTGTCATCTTCTGTGCCTTGGATCCGCAAGATAGGAAATGGAT
CACAGACGGCCCTTGCTCAAGAGTCTTTGGATTTGTGGCCCGGAAGCAGGGCAGCGCCAC
AGACAACGTGTGCCACCTGTTTGCGGAGCATGACCCAGAGCAGCCCGCCAGCGCCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTTCTCCGCAAACGGCGGCCAACTCCGCGGCAGAGCTGCTGAAGCAGGGGGCAGCCTG
CAACGTGTGGTACCTCAACTCCGTGGAGATGGAGTCTCTCACGGGCCCCCAGGCCGTGCA
GAAGGCACTGAGCATCACCCTGGTCCAAGAGCCGCCCCCTCTGTGCACGGTCGTGCACTT
CAAGGTGTCAGCCCAGGGCATCACCCTGACGGACAACCAGAGGAAGCTCTTCTTCCGGAG
ACACTACCCCGTGAGCAGTGTCATCTTCTGTGCCTTGGATCCGCAAGATAGGAAATGGAT
CACAGACGGCCCTTGCTCAAGAGTCTTTGGATTTGTGGCCCGGAAGCAGGGCAGCGCCAC
AGACAACGTGTGCCACCTGTTTGCGGAGCATGACCCAGAGCAGCCCGCCAGCGCCAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|10435837|dbj|BAB14682.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|10435837|dbj|BAB14682.1|

Aligned organism(s): 18 entry(ies)

More info

Aligned organism(s): 18 entry(ies)

Help | Less info


               
               54-226, gnl|bosTau2|chr4 (44382549-44382721)
               

               
               54-226, gnl|canFam2|chr16 (3419888-3419757)
               

               
               54-226, gnl|danRer3|chr14 (8816041-8815915)
               

               
               54-226, gnl|dasNov1|scaffold_43704 (1162-1022)
               

               
               54-226, gnl|fr1|chrUn (132884802-132884680)
               

               
               54-226, gnl|galGal2|chr2 (54895037-54895174)
               

               
               54-226, gnl|hg17|chr7 (47096512-47096652)
               

               
               54-226, gnl|Hg17|chr7 (47096706-47096534)
               

               
               54-226, gnl|loxAfr1|scaffold_21720 (19395-19261)
               

               
               54-226, gnl|mm7|chr11 (8389096-8389229)
               

               
               54-226, gnl|Mm7|chr11 (8389283-8389111)
               

               
               54-226, gnl|monDom2|scaffold_5 (65340853-65340727)
               

               
               54-226, gnl|oryCun1|scaffold_209920 (119306-119432)
               

               
               54-226, gnl|panTro1|chr6 (48559287-48559427)
               

               
               54-226, gnl|rheMac2|chr3 (79197723-79197583)
               

               
               54-226, gnl|rn3|chr14 (89023477-89023616)
               

               
               54-226, gnl|tetNig1|chr15 (7136231-7136109)
               

               
               54-226, gnl|xenTro1|scaffold_26 (1757734-1757613)

Aligned organism(s): 18 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-226, gnl|bosTau2|chr4 (44382549-44382721)
               

               
               54-226, gnl|canFam2|chr16 (3419888-3419757)
               

               
               54-226, gnl|danRer3|chr14 (8816041-8815915)
               

               
               54-226, gnl|dasNov1|scaffold_43704 (1162-1022)
               

               
               54-226, gnl|fr1|chrUn (132884802-132884680)
               

               
               54-226, gnl|galGal2|chr2 (54895037-54895174)
               

               
               54-226, gnl|hg17|chr7 (47096512-47096652)
               

               
               54-226, gnl|Hg17|chr7 (47096706-47096534)
               

               
               54-226, gnl|loxAfr1|scaffold_21720 (19395-19261)
               

               
               54-226, gnl|mm7|chr11 (8389096-8389229)
               

               
               54-226, gnl|Mm7|chr11 (8389283-8389111)
               

               
               54-226, gnl|monDom2|scaffold_5 (65340853-65340727)
               

               
               54-226, gnl|oryCun1|scaffold_209920 (119306-119432)
               

               
               54-226, gnl|panTro1|chr6 (48559287-48559427)
               

               
               54-226, gnl|rheMac2|chr3 (79197723-79197583)
               

               
               54-226, gnl|rn3|chr14 (89023477-89023616)
               

               
               54-226, gnl|tetNig1|chr15 (7136231-7136109)
               

               
               54-226, gnl|xenTro1|scaffold_26 (1757734-1757613)

	54-226, gnl\|bosTau2\|chr4 (44382549-44382721)
	54-226, gnl\|canFam2\|chr16 (3419888-3419757)
	54-226, gnl\|danRer3\|chr14 (8816041-8815915)
	54-226, gnl\|dasNov1\|scaffold_43704 (1162-1022)
	54-226, gnl\|fr1\|chrUn (132884802-132884680)
	54-226, gnl\|galGal2\|chr2 (54895037-54895174)
	54-226, gnl\|hg17\|chr7 (47096512-47096652)
	54-226, gnl\|Hg17\|chr7 (47096706-47096534)
	54-226, gnl\|loxAfr1\|scaffold_21720 (19395-19261)
	54-226, gnl\|mm7\|chr11 (8389096-8389229)
	54-226, gnl\|Mm7\|chr11 (8389283-8389111)
	54-226, gnl\|monDom2\|scaffold_5 (65340853-65340727)
	54-226, gnl\|oryCun1\|scaffold_209920 (119306-119432)
	54-226, gnl\|panTro1\|chr6 (48559287-48559427)
	54-226, gnl\|rheMac2\|chr3 (79197723-79197583)
	54-226, gnl\|rn3\|chr14 (89023477-89023616)
	54-226, gnl\|tetNig1\|chr15 (7136231-7136109)
	54-226, gnl\|xenTro1\|scaffold_26 (1757734-1757613)