Ss1.1-Pig4-TMW8013G22.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGAAGACGAGTCCGCCAGGGACCCCTGGGCTCCCTCACGTGGCTGGCAAAGCTCCTGCC TTCTTTCCTCTCCTGTCGCTCCAGAGCTGCGGGGAAGCATGGATCGGCACCGGCCACGGC AGCACCACCCGGCGGCTGAGGCTCCCTACCCCTCCTCCGCCTCGCTCCGCAGCTGCCGGG AAGGCAAGATGCCTCGCAGGAAGGGTCCCCAGCACCCTCCCCCGTCTGGCGGCCGCGAGG AGCCGGGAGAGAAACGCCCCAAGTTTCTGGACAAATTTGCCAGCATAAGAATTCCAGGGA GCAAGAAGGAGAGGCCTCCACTTTCCAACCTGAAGACGGCATTTGCAAGCAGTGATTGCT TTTCAGAGATGAATGAAAACATTCTAAATCCACTGTCAGAGAAGGAACTCCTAGATCTTT TTGAAAAGATGATGGAAGATATGAATTTAAATGAAGATAAAAAGGCACCATTGCGGGAAA AGGACTTCAGCATCAAAAAAGAAATGGTGATGCAGTACATTAATACTGCTTCCAAGACAG GAAGTCTCAAGAGTAGTCGACAGATCCCACCCCAGGAATTCATCCATGACCTGAAAATGG GGTCTTCAGACGAGCGGCTTGTCGGGTGCTTGGAGTCCCTCCGTGTGTCCTTGACAAGCA ATCCTGTGAGTTGGGTGGAAAGTTTTGGACGTGAAGGGCTTGGATTATTATTGGACATTT TGGAAAGGCTGATTAGTGGCAAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGAAGACGAGTCCGCCAGGGACCCCTGGGCTCCCTCACGTGGCTGGCAAAGCTCCTGCC TTCTTTCCTCTCCTGTCGCTCCAGAGCTGCGGGGAAGCATGGATCGGCACCGGCCACGGC AGCACCACCCGGCGGCTGAGGCTCCCTACCCCTCCTCCGCCTCGCTCCGCAGCTGCCGGG AAGGCAAGATGCCTCGCAGGAAGGGTCCCCAGCACCCTCCCCCGTCTGGCGGCCGCGAGG AGCCGGGAGAGAAACGCCCCAAGTTTCTGGACAAATTTGCCAGCATAAGAATTCCAGGGA GCAAGAAGGAGAGGCCTCCACTTTCCAACCTGAAGACGGCATTTGCAAGCAGTGATTGCT TTTCAGAGATGAATGAAAACATTCTAAATCCACTGTCAGAGAAGGAACTCCTAGATCTTT TTGAAAAGATGATGGAAGATATGAATTTAAATGAAGATAAAAAGGCACCATTGCGGGAAA AGGACTTCAGCATCAAAAAAGAAATGGTGATGCAGTACATTAATACTGCTTCCAAGACAG GAAGTCTCAAGAGTAGTCGACAGATCCCACCCCAGGAATTCATCCATGACCTGAAAATGG GGTCTTCAGACGAGCGGCTTGTCGGGTGCTTGGAGTCCCTCCGTGTGTCCTTGACAAGCA ATCCTGTGAGTTGGGTGGAAAGTTTTGGACGTGAAGGGCTTGGATTATTATTGGACATTT TGGAAAGGCTGATTAGTGGCAAGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 123-230, - strand, RNAz p=0.576969 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 123-230, - strand, RNAz p=0.576969 |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 6-266, gnl|bosTau2|chr11 (65203639-65203906) | |
| 6-266, gnl|canFam2|chr22 (19024877-19025233) | |
| 6-266, gnl|dasNov1|scaffold_993 (40821-40489) | |
| 6-266, gnl|hg17|chr13 (59635714-59636073) | |
| 6-266, gnl|Hg17|chr13 (59635990-59635722) | |
| 6-266, gnl|loxAfr1|scaffold_48991 (14723-14366) | |
| 6-266, gnl|mm7|chr14 (81854381-81854626) | |
| 6-266, gnl|monDom2|scaffold_47 (7374847-7374480) | |
| 6-266, gnl|oryCun1|scaffold_192576 (84708-84388) | |
| 6-266, gnl|panTro1|chr14_random (27618789-27618428) | |
| 6-266, gnl|rheMac2|chr17 (39254759-39255114) | |
| 6-266, gnl|rn3|chr15 (69283299-69283544) | |
| 268-439, gnl|bosTau2|chr11 (65258600-65258772) | |
| 268-439, gnl|canFam2|chr22 (18978636-18978853) | |
| 268-439, gnl|dasNov1|scaffold_68774 (47308-47536) | |
| 268-439, gnl|echTel1|scaffold_61937 (667-438) | |
| 268-439, gnl|fr1|chrUn (136653038-136653272) | |
| 268-439, gnl|hg17|chr13 (59584127-59584355) | |
| 268-439, gnl|Hg17|chr13 (59584320-59584139) | |
| 268-439, gnl|loxAfr1|scaffold_5737 (80491-80267) | |
| 268-439, gnl|mm7|chr14 (81805064-81805290) | |
| 268-439, gnl|Mm7|chr14 (81805255-81805074) | |
| 268-439, gnl|monDom2|scaffold_47 (7445116-7444884) | |
| 268-439, gnl|oryCun1|scaffold_207101 (58493-58265) | |
| 268-439, gnl|panTro1|chr14_random (27670256-27670028) | |
| 268-439, gnl|rheMac2|chr17 (39203160-39203386) | |
| 268-439, gnl|rn3|chr15 (69233099-69233330) | |
| 268-439, gnl|xenTro1|scaffold_827 (223535-223310) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-266, gnl|bosTau2|chr11 (65203639-65203906) | |
| 6-266, gnl|canFam2|chr22 (19024877-19025233) | |
| 6-266, gnl|dasNov1|scaffold_993 (40821-40489) | |
| 6-266, gnl|hg17|chr13 (59635714-59636073) | |
| 6-266, gnl|Hg17|chr13 (59635990-59635722) | |
| 6-266, gnl|loxAfr1|scaffold_48991 (14723-14366) | |
| 6-266, gnl|mm7|chr14 (81854381-81854626) | |
| 6-266, gnl|monDom2|scaffold_47 (7374847-7374480) | |
| 6-266, gnl|oryCun1|scaffold_192576 (84708-84388) | |
| 6-266, gnl|panTro1|chr14_random (27618789-27618428) | |
| 6-266, gnl|rheMac2|chr17 (39254759-39255114) | |
| 6-266, gnl|rn3|chr15 (69283299-69283544) | |
| 268-439, gnl|bosTau2|chr11 (65258600-65258772) | |
| 268-439, gnl|canFam2|chr22 (18978636-18978853) | |
| 268-439, gnl|dasNov1|scaffold_68774 (47308-47536) | |
| 268-439, gnl|echTel1|scaffold_61937 (667-438) | |
| 268-439, gnl|fr1|chrUn (136653038-136653272) | |
| 268-439, gnl|hg17|chr13 (59584127-59584355) | |
| 268-439, gnl|Hg17|chr13 (59584320-59584139) | |
| 268-439, gnl|loxAfr1|scaffold_5737 (80491-80267) | |
| 268-439, gnl|mm7|chr14 (81805064-81805290) | |
| 268-439, gnl|Mm7|chr14 (81805255-81805074) | |
| 268-439, gnl|monDom2|scaffold_47 (7445116-7444884) | |
| 268-439, gnl|oryCun1|scaffold_207101 (58493-58265) | |
| 268-439, gnl|panTro1|chr14_random (27670256-27670028) | |
| 268-439, gnl|rheMac2|chr17 (39203160-39203386) | |
| 268-439, gnl|rn3|chr15 (69233099-69233330) | |
| 268-439, gnl|xenTro1|scaffold_827 (223535-223310) |