Non-Coding RNA Search

Ss1.1-Pig4-TMW8015I05.5

Sequence:


               
               GGCATATGGAGATTCCCAGGCTAGGGGTCTAATCAGAGCTGTAGCTGCTGGCGTACACCA
GAGCCACAGCAATGCAGGATCTGAGCCTCATCTGTGACCTATACCACAGCTCCGGCAACG
CCGGATACTAAACCCACTGAGCAAGGCCAGGGATCGAACCCACAACCTCACAGTTCCTAG
TCAGATTCATTCTACTGCATCATGACGGGAACTCCGATCTGGACTTTAAACAATCTAAAT
TTGCAGTGTTTGACTTAGGTAATTAAAATTATTTTTTTGAAAAAGCTAATGCATTTAAAT
CTTGTGACAGTAGAACAAGAGTGATGAGGAATAGAAGAAACTGTTCCGTTAACCTTATAT
TTGTTTAAGTTCACACTTTATCTAAAAAGCTTCTAGCTGAGATGCAAACCTAGGTCTTTA
CATTCTAGTGTCTACTTGTGAATGGAATTAAGGAAAGCAGTTATTACTCAGTTTGATTTC
TTTAGGTCTGAATTAGTTGGAGAAATTCCTAAGTCACCTCATATGATAAGTTCTCTTTTA
CTCTTTATTATATTTAACAAAAATAAGCTTAAAAAATTAAAAGTTGGTCTAAAATACAAT
TTATTATGTACTTACATTATTGTGGTCTGTTTCAATAGATACCTGTTTGTTGGGAAAGAT
GTGTTCGATGTTTACACACACAGCTTGAAAACCCAGAAGATGGAAGGCTGATTTATACTG
GGAATCTGGCCCGAACAGTGTTTGGTGGGTAATCACAAGTGAGGATATTCCCCACCTCCC
CCTTAATTGTAAAAAAAGGCTCTTAACGTAAGTTTTTAGCACCTTGTAACTGCAAGAAAA
GTTATAATTTTTTTCTTGTGGCTTGTTGCTGAAAGATTTAGAGGTTGAGACTTTTGCACA
TTTAGGAGATTTCTAAAAGTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
AAAAGCAGCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCATATGGAGATTCCCAGGCTAGGGGTCTAATCAGAGCTGTAGCTGCTGGCGTACACCA
GAGCCACAGCAATGCAGGATCTGAGCCTCATCTGTGACCTATACCACAGCTCCGGCAACG
CCGGATACTAAACCCACTGAGCAAGGCCAGGGATCGAACCCACAACCTCACAGTTCCTAG
TCAGATTCATTCTACTGCATCATGACGGGAACTCCGATCTGGACTTTAAACAATCTAAAT
TTGCAGTGTTTGACTTAGGTAATTAAAATTATTTTTTTGAAAAAGCTAATGCATTTAAAT
CTTGTGACAGTAGAACAAGAGTGATGAGGAATAGAAGAAACTGTTCCGTTAACCTTATAT
TTGTTTAAGTTCACACTTTATCTAAAAAGCTTCTAGCTGAGATGCAAACCTAGGTCTTTA
CATTCTAGTGTCTACTTGTGAATGGAATTAAGGAAAGCAGTTATTACTCAGTTTGATTTC
TTTAGGTCTGAATTAGTTGGAGAAATTCCTAAGTCACCTCATATGATAAGTTCTCTTTTA
CTCTTTATTATATTTAACAAAAATAAGCTTAAAAAATTAAAAGTTGGTCTAAAATACAAT
TTATTATGTACTTACATTATTGTGGTCTGTTTCAATAGATACCTGTTTGTTGGGAAAGAT
GTGTTCGATGTTTACACACACAGCTTGAAAACCCAGAAGATGGAAGGCTGATTTATACTG
GGAATCTGGCCCGAACAGTGTTTGGTGGGTAATCACAAGTGAGGATATTCCCCACCTCCC
CCTTAATTGTAAAAAAAGGCTCTTAACGTAAGTTTTTAGCACCTTGTAACTGCAAGAAAA
GTTATAATTTTTTTCTTGTGGCTTGTTGCTGAAAGATTTAGAGGTTGAGACTTTTGCACA
TTTAGGAGATTTCTAAAAGTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
AAAAGCAGCAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               219-810, gnl|bosTau2|chr14 (20733526-20732930)
               

               
               219-810, gnl|Hg17|chr8 (75052591-75053720)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               219-810, gnl|bosTau2|chr14 (20733526-20732930)
               

               
               219-810, gnl|Hg17|chr8 (75052591-75053720)

	219-810, gnl\|bosTau2\|chr14 (20733526-20732930)
	219-810, gnl\|Hg17\|chr8 (75052591-75053720)