Non-Coding RNA Search

Ss1.1-Pig4-TMW8016N05.5

Sequence:


               
               GCGGCTCGAGAGCATTTCCTTTGAACTTAAAAACATGGTATGACTTCTGTCACCACTTTA
TTTAGCATTATTCTAGAAGTCCTAGCCAGTAAAATAAAAAAAAAAAATCAGTAATATGAG
GAATGAAAGGAAGAAACAAATTTTTATTATTTATGGATGAATATCTATATGGAAAATTTA
AGAAAAATCTATAAATACACTACTAGCACTGATGCTGAATACAAGATAACTTAAAAGCAT
GCTTTTGTACCTTAGGAAAACTGTTTAGAGAGTTTGATTTTAAAAATATTCCCAGAGTTC
CTGCTGTAGCATAGTGTATTAAGAATCCGGCTGCAGTGGTTTGATCCCCTGCCCACTGCA
GTGGATTAAAGGATCTAGCGTTGCTGCAGCTGCGGCTCAGATTTGGTCCATGGCCCGGAA
ACTTTTCCATGTGCTGTGGATGCAGCCATAAAATTTAAAAAAATTTTCAGTCATAAGAGT
GACAAAATTTCATCTTTCAGAGATAAGTCTATTAAAAATATGCAAGAACTTCATGGAAAA
ATTATAAAACTCTATTAAAGAGCCCAAAACTATTTAAAATATATGAATAAACACAAAAGC
CTGGGAATGTTGAAAAATGTCACATATTTTCAGTGTATTTGTTAATTCACTATCATTTCA
AACCAAATTCAAGTTTATCCTGTAGAACTTGGGAAGCTGATCCTAAAATTTATACAAGAA
GGTAAAAGGTCAAGCTTACTTAAGAAGAAAAAGGAAGTGGGGGATTCATTTAATCAAATA
TAAAGCCAAAGTAATTAGAATAGAAATAGATGAATGAGACATGAACAAGTTCAAGAATAG
ACGGATATTTATAGGAACTCTGTATTCATATTGGAGATGGTATAACAAATCAGTGGGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGAGCATTTCCTTTGAACTTAAAAACATGGTATGACTTCTGTCACCACTTTA
TTTAGCATTATTCTAGAAGTCCTAGCCAGTAAAATAAAAAAAAAAAATCAGTAATATGAG
GAATGAAAGGAAGAAACAAATTTTTATTATTTATGGATGAATATCTATATGGAAAATTTA
AGAAAAATCTATAAATACACTACTAGCACTGATGCTGAATACAAGATAACTTAAAAGCAT
GCTTTTGTACCTTAGGAAAACTGTTTAGAGAGTTTGATTTTAAAAATATTCCCAGAGTTC
CTGCTGTAGCATAGTGTATTAAGAATCCGGCTGCAGTGGTTTGATCCCCTGCCCACTGCA
GTGGATTAAAGGATCTAGCGTTGCTGCAGCTGCGGCTCAGATTTGGTCCATGGCCCGGAA
ACTTTTCCATGTGCTGTGGATGCAGCCATAAAATTTAAAAAAATTTTCAGTCATAAGAGT
GACAAAATTTCATCTTTCAGAGATAAGTCTATTAAAAATATGCAAGAACTTCATGGAAAA
ATTATAAAACTCTATTAAAGAGCCCAAAACTATTTAAAATATATGAATAAACACAAAAGC
CTGGGAATGTTGAAAAATGTCACATATTTTCAGTGTATTTGTTAATTCACTATCATTTCA
AACCAAATTCAAGTTTATCCTGTAGAACTTGGGAAGCTGATCCTAAAATTTATACAAGAA
GGTAAAAGGTCAAGCTTACTTAAGAAGAAAAAGGAAGTGGGGGATTCATTTAATCAAATA
TAAAGCCAAAGTAATTAGAATAGAAATAGATGAATGAGACATGAACAAGTTCAAGAATAG
ACGGATATTTATAGGAACTCTGTATTCATATTGGAGATGGTATAACAAATCAGTGGGAAA

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

Help | Less info


               
               13-291, gnl|bosTau2|chr15 (3552446-3552727)
               

               
               13-291, gnl|Hg17|chr11 (95254716-95254418)
               


               
               454-897, gnl|bosTau2|chr15 (3552715-3553131)
               

               
               454-897, gnl|canFam2|chr21 (8249869-8249434)
               

               
               454-897, gnl|dasNov1|scaffold_48311 (38226-38629)
               

               
               454-897, gnl|hg17|chr11 (95253862-95254288)
               

               
               454-897, gnl|Hg17|chr11 (95254430-95253998)
               

               
               454-897, gnl|panTro1|chr9 (97167856-97168285)
               

               
               454-897, gnl|rheMac2|chr14 (94432817-94433247)

Aligned organism(s): 9 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-291, gnl|bosTau2|chr15 (3552446-3552727)
               

               
               13-291, gnl|Hg17|chr11 (95254716-95254418)
               


               
               454-897, gnl|bosTau2|chr15 (3552715-3553131)
               

               
               454-897, gnl|canFam2|chr21 (8249869-8249434)
               

               
               454-897, gnl|dasNov1|scaffold_48311 (38226-38629)
               

               
               454-897, gnl|hg17|chr11 (95253862-95254288)
               

               
               454-897, gnl|Hg17|chr11 (95254430-95253998)
               

               
               454-897, gnl|panTro1|chr9 (97167856-97168285)
               

               
               454-897, gnl|rheMac2|chr14 (94432817-94433247)

	13-291, gnl\|bosTau2\|chr15 (3552446-3552727)
	13-291, gnl\|Hg17\|chr11 (95254716-95254418)

	454-897, gnl\|bosTau2\|chr15 (3552715-3553131)
	454-897, gnl\|canFam2\|chr21 (8249869-8249434)
	454-897, gnl\|dasNov1\|scaffold_48311 (38226-38629)
	454-897, gnl\|hg17\|chr11 (95253862-95254288)
	454-897, gnl\|Hg17\|chr11 (95254430-95253998)
	454-897, gnl\|panTro1\|chr9 (97167856-97168285)
	454-897, gnl\|rheMac2\|chr14 (94432817-94433247)