Ss1.1-Pig4-TMW8017A17.3
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GCAACAACTACAAACAGAATTTTAAAACACTTTTATCTCATTTTGGAAAAGTTAACAGTT
AAGACAACTATATAGGTACCATGGAATTTTCTAAGACATCTAAACTCAGGTATAAAACCA
AAGGAAAACATTACTATCTCTTTAACAGATAGCTTATGTGAAACCTCATGCTTACTCATC
TTTTCATAGATGGGTTGATTTGGTGAGGATTGTGATCCAGTGATTGCTTAGCAGCAATTT
TACCAAACTGTAAATTCTTTTATTAACAGGCATTACAAACAGGTAATACTAATCTTTTTT
TTTTCTCTGTCTTTTTGGGGCCTAACCCAGGGCATGTGGAGGTTCCCAGGATAGGGGTCG
AAGCAGAGCTATAGTGGGCGGTCTATCCCACAGCCACAGCAACATAGATGCAGGCCACGT
CTGTGACCTACACCACCGCTCACAGCAACACCAGATCCTTAACCCACCGAGCAGCGCCAG
GGGTCAAACTTGCAAGTCCTCATGGATACTAGTCAGATTCGTTTCCGCTGTGCCACAACG
AGAACTCCCTACTAATCTTATTTAAAAACCACGAGTGCCACACTGGTGAATATAGAGCTC
ATGAATAACTTTAAAGTATGTCCCATTTTAAAATGCAACACTCAGCATACAAAAACCTAT
ACTAAACAAAGAAGCTATAATATGAATACATGATTGATGTGTCTATAAACAAAGAAGCTA
TAATGTATATATGATTGATGTGTCTAAAATGATATATGTAGATTACATAATTAAAGTTAT
TTCATCAGGAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCAACAACTACAAACAGAATTTTAAAACACTTTTATCTCATTTTGGAAAAGTTAACAGTT
AAGACAACTATATAGGTACCATGGAATTTTCTAAGACATCTAAACTCAGGTATAAAACCA
AAGGAAAACATTACTATCTCTTTAACAGATAGCTTATGTGAAACCTCATGCTTACTCATC
TTTTCATAGATGGGTTGATTTGGTGAGGATTGTGATCCAGTGATTGCTTAGCAGCAATTT
TACCAAACTGTAAATTCTTTTATTAACAGGCATTACAAACAGGTAATACTAATCTTTTTT
TTTTCTCTGTCTTTTTGGGGCCTAACCCAGGGCATGTGGAGGTTCCCAGGATAGGGGTCG
AAGCAGAGCTATAGTGGGCGGTCTATCCCACAGCCACAGCAACATAGATGCAGGCCACGT
CTGTGACCTACACCACCGCTCACAGCAACACCAGATCCTTAACCCACCGAGCAGCGCCAG
GGGTCAAACTTGCAAGTCCTCATGGATACTAGTCAGATTCGTTTCCGCTGTGCCACAACG
AGAACTCCCTACTAATCTTATTTAAAAACCACGAGTGCCACACTGGTGAATATAGAGCTC
ATGAATAACTTTAAAGTATGTCCCATTTTAAAATGCAACACTCAGCATACAAAAACCTAT
ACTAAACAAAGAAGCTATAATATGAATACATGATTGATGTGTCTATAAACAAAGAAGCTA
TAATGTATATATGATTGATGTGTCTAAAATGATATATGTAGATTACATAATTAAAGTTAT
TTCATCAGGAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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149-300, gnl|bosTau2|chr17 (24942413-24942264) |
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149-300, gnl|canFam2|chr37 (10062079-10061963) |
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149-300, gnl|dasNov1|scaffold_200801 (1587-1702) |
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149-300, gnl|echTel1|scaffold_221121 (2188-2304) |
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149-300, gnl|galGal2|chr7 (11226665-11226780) |
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149-300, gnl|Hg17|chr11 (86209467-86209622) |
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149-300, gnl|hg17|chr2 (70948893-70949018) |
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149-300, gnl|loxAfr1|scaffold_31359 (28652-28537) |
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149-300, gnl|mm7|chr1 (55400469-55400364) |
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149-300, gnl|Mm7|chr1 (55400456-55400325) |
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149-300, gnl|monDom2|scaffold_48 (13661004-13661112) |
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149-300, gnl|oryCun1|scaffold_109583 (20025-20141) |
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149-300, gnl|panTro1|chr12 (73276559-73276683) |
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149-300, gnl|rheMac2|chr13 (71117584-71117710) |
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149-300, gnl|rn3|chr9 (53946704-53946597) |
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149-300, gnl|xenTro1|scaffold_48 (2283606-2283747) |
| |
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550-708, gnl|bosTau2|chr17 (24942277-24942118) |
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550-708, gnl|Hg17|chr11 (86209609-86209767) |
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550-708, gnl|Mm7|chr1 (55400338-55400179) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
149-300, gnl|bosTau2|chr17 (24942413-24942264) |
|
149-300, gnl|canFam2|chr37 (10062079-10061963) |
|
149-300, gnl|dasNov1|scaffold_200801 (1587-1702) |
|
149-300, gnl|echTel1|scaffold_221121 (2188-2304) |
|
149-300, gnl|galGal2|chr7 (11226665-11226780) |
|
149-300, gnl|Hg17|chr11 (86209467-86209622) |
|
149-300, gnl|hg17|chr2 (70948893-70949018) |
|
149-300, gnl|loxAfr1|scaffold_31359 (28652-28537) |
|
149-300, gnl|mm7|chr1 (55400469-55400364) |
|
149-300, gnl|Mm7|chr1 (55400456-55400325) |
|
149-300, gnl|monDom2|scaffold_48 (13661004-13661112) |
|
149-300, gnl|oryCun1|scaffold_109583 (20025-20141) |
|
149-300, gnl|panTro1|chr12 (73276559-73276683) |
|
149-300, gnl|rheMac2|chr13 (71117584-71117710) |
|
149-300, gnl|rn3|chr9 (53946704-53946597) |
|
149-300, gnl|xenTro1|scaffold_48 (2283606-2283747) |
| |
|
550-708, gnl|bosTau2|chr17 (24942277-24942118) |
|
550-708, gnl|Hg17|chr11 (86209609-86209767) |
|
550-708, gnl|Mm7|chr1 (55400338-55400179) |
