Non-Coding RNA Search

Ss1.1-Pig4-TMW8017D10.3

Sequence:


               
               ACATTATGGGTTAAGGACAGTGTCAAAGTGATGAAGCTTAACACTTGACCTAAACTTCTA
TTTTCTTAAGGCAGTAAATGTATACTGATTCCTAGAAATCTATTTATTTAAAAAAAAAGA
CAAAACCTTGACATAAGAACTTGCTGTATATAGATAGCTACTTCCACATAAATATTGCAG
TTTTTTTAAAAATGAAATTTCAGCCTCAAAAGTGGATCTGATTAGAAAAATCATACTAGA
TTATTAGTTTATTCTATTACTGGACATGTGAATCTCTTCTTCCTTTGAAGAAATTATAAA
TTTAAGCTATTGTGGTATGAAGTCTTCTGTACAGTTTTTGTTTTTAAACTAGTATGTTTC
AGCATTTTGTCTGAAAAGAAAACACCACTATGTACATATGTATTATATAAACTTAATCTT
TTAATACTGTTTATTTTTAGCCCATTGTTTAAAAAATAAAAGTTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATTATGGGTTAAGGACAGTGTCAAAGTGATGAAGCTTAACACTTGACCTAAACTTCTA
TTTTCTTAAGGCAGTAAATGTATACTGATTCCTAGAAATCTATTTATTTAAAAAAAAAGA
CAAAACCTTGACATAAGAACTTGCTGTATATAGATAGCTACTTCCACATAAATATTGCAG
TTTTTTTAAAAATGAAATTTCAGCCTCAAAAGTGGATCTGATTAGAAAAATCATACTAGA
TTATTAGTTTATTCTATTACTGGACATGTGAATCTCTTCTTCCTTTGAAGAAATTATAAA
TTTAAGCTATTGTGGTATGAAGTCTTCTGTACAGTTTTTGTTTTTAAACTAGTATGTTTC
AGCATTTTGTCTGAAAAGAAAACACCACTATGTACATATGTATTATATAAACTTAATCTT
TTAATACTGTTTATTTTTAGCCCATTGTTTAAAAAATAAAAGTTAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               306-413, - strand, RNAz p=0.914355

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               306-413, - strand, RNAz p=0.914355

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-468, gnl|bosTau2|chr14 (42828329-42827866)
               

               
               1-468, gnl|Hg17|chr8 (95962105-95961651)
               

               
               1-468, gnl|Mm7|chr4 (11131169-11131597)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-468, gnl|bosTau2|chr14 (42828329-42827866)
               

               
               1-468, gnl|Hg17|chr8 (95962105-95961651)
               

               
               1-468, gnl|Mm7|chr4 (11131169-11131597)

	1-468, gnl\|bosTau2\|chr14 (42828329-42827866)
	1-468, gnl\|Hg17\|chr8 (95962105-95961651)
	1-468, gnl\|Mm7\|chr4 (11131169-11131597)