Non-Coding RNA Search

Ss1.1-Pig4-TMW8017F15.3

Sequence:


               
               TACCATCTTGAGCGCCGTCCCTCGGCAGATGTTCAGCGATGCGGGCAGTGGGGATGACGC
CCTGGACGGGGATGATGACCTGGTGATCGACATCCCGGAATGAACCCCCTCTGCCCGACC
CCCTGCCCGGCGCCCTCTGGGCCAGCACACACGAGCCCCCAGCTTCCGCAGAGACATTTA
TTGACACCCAGTTGCCATGCTGCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCAC
GAGTGTCCCCCGGAAGGTGGGCCCCCTCCAGGGAGGGCAGGTGTCCTGCCCTCGCGTCCC
AGCCCGACACTGGGGACAGTTATTGAAATGAGTGGCCAGGGGCATCTGCCACCTCTCAGA
GAGGCAGAGACCCGGCGGTGGCCCCCCCGCTTAAATGGGCAGCTGTACAGGGCTAGGTGT
TTGTGGTGGTTTTTGTGTTTTTGTGTTTTTGAAATGAAGATTCTGCCATAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACCATCTTGAGCGCCGTCCCTCGGCAGATGTTCAGCGATGCGGGCAGTGGGGATGACGC
CCTGGACGGGGATGATGACCTGGTGATCGACATCCCGGAATGAACCCCCTCTGCCCGACC
CCCTGCCCGGCGCCCTCTGGGCCAGCACACACGAGCCCCCAGCTTCCGCAGAGACATTTA
TTGACACCCAGTTGCCATGCTGCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCAC
GAGTGTCCCCCGGAAGGTGGGCCCCCTCCAGGGAGGGCAGGTGTCCTGCCCTCGCGTCCC
AGCCCGACACTGGGGACAGTTATTGAAATGAGTGGCCAGGGGCATCTGCCACCTCTCAGA
GAGGCAGAGACCCGGCGGTGGCCCCCCCGCTTAAATGGGCAGCTGTACAGGGCTAGGTGT
TTGTGGTGGTTTTTGTGTTTTTGTGTTTTTGAAATGAAGATTCTGCCATAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               267-456, - strand, RNAz p=0.986356

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               267-456, - strand, RNAz p=0.986356

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_003586, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_003586, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-475, gnl|bosTau2|chr25 (25354604-25355086)
               

               
               1-475, gnl|Hg17|chr16 (29924162-29924602)
               

               
               1-475, gnl|Mm7|chr7 (122949430-122949002)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-475, gnl|bosTau2|chr25 (25354604-25355086)
               

               
               1-475, gnl|Hg17|chr16 (29924162-29924602)
               

               
               1-475, gnl|Mm7|chr7 (122949430-122949002)

	1-475, gnl\|bosTau2\|chr25 (25354604-25355086)
	1-475, gnl\|Hg17\|chr16 (29924162-29924602)
	1-475, gnl\|Mm7\|chr7 (122949430-122949002)