Non-Coding RNA Search

Ss1.1-Pig4-TMW8017I16.5

Sequence:


               
               TCCACAGTGACCCGAGCTCCTGCAGTCAGATTCTTAACCCACTGTACCACAGTGGGAATG
CCAGGTTGGGCCTTTTTTTTTCTTCCTAGGCTGCTCCCAAAAGCCTGGGCAGGAAGCTGT
GTGCCCAGGGCTGAGGCTCTGTCCCCTCCTCTTTGCTGGGATGTGTGCCTCAACCTCTGT
ATGCCCTTTGGTGCAGTGTCAGGCCTTTAAATAGGACCCAGAGAAGGTGTGGCACTGCCT
GAGGGTCACAGAGAACCAGCACTGAGTAGTGGAAGAGGGGGCTACGTGGGGTGAATAGAC
CACATTGAAAGGGCACAATGCCCTCCTGTGGTGTCTGCTGCTTCCTGGGGTGGGAACATG
GAAGAGCACAGAGGACAAGAAGGAGTTGGGTGGGGGAAGGGGTNGAGGGGGCCTGGTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCACAGTGACCCGAGCTCCTGCAGTCAGATTCTTAACCCACTGTACCACAGTGGGAATG
CCAGGTTGGGCCTTTTTTTTTCTTCCTAGGCTGCTCCCAAAAGCCTGGGCAGGAAGCTGT
GTGCCCAGGGCTGAGGCTCTGTCCCCTCCTCTTTGCTGGGATGTGTGCCTCAACCTCTGT
ATGCCCTTTGGTGCAGTGTCAGGCCTTTAAATAGGACCCAGAGAAGGTGTGGCACTGCCT
GAGGGTCACAGAGAACCAGCACTGAGTAGTGGAAGAGGGGGCTACGTGGGGTGAATAGAC
CACATTGAAAGGGCACAATGCCCTCCTGTGGTGTCTGCTGCTTCCTGGGGTGGGAACATG
GAAGAGCACAGAGGACAAGAAGGAGTTGGGTGGGGGAAGGGGTNGAGGGGGCCTGGTGGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               177-417, + strand, RNAz p=0.993798

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               177-417, + strand, RNAz p=0.993798

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BC030139, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BC030139, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               67-417, gnl|bosTau2|chr8 (37958564-37958215)
               

               
               67-417, gnl|Hg17|chr9 (33452360-33452012)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-417, gnl|bosTau2|chr8 (37958564-37958215)
               

               
               67-417, gnl|Hg17|chr9 (33452360-33452012)

	67-417, gnl\|bosTau2\|chr8 (37958564-37958215)
	67-417, gnl\|Hg17\|chr9 (33452360-33452012)