Non-Coding RNA Search

Ss1.1-Pig4-TMW8019M10.5

Sequence:


               
               TTTTGATAGCCCTATTCTAATTTCTGAGAAGACAGATTTACTAGGCCTGACTTATCCTAG
TGTTTAGTTAGATGTTTATATACCAACAGCAGCAGTTTGTGGGTCTTTTGTGTTCTATTT
AGTCTCTGCCTCTCTTACTTCATTTCTTCTAGTTTCCAATGCATCCATTAATAACTGGCT
TTTCCATCCTTTATTTCAGGGGTTGCAGTTGTAAATGCCTGCAGGTTTCAGTTCTGTAAG
ATAGTTCTGATATTTATTTTCTTTATTTCTTGAAACACTGCTGTGTTTTTGTTTTCTTTT
CTACTTTTGATAGACATTGGAAAAGAGAATACTCTTAAAAAAACAAAAGATTTCAAATGC
AATGGTAAAGAGAAGTTGATGCTTCTAAGAGAGAGTGTTTGGGTTTAAGGTCCACTGGAA
CATGAGCCTTTAATCTGTAGGAGAAGGCTATTACTCCTTGGCTCCTGTTGATTGTTGCCC
AATATTGACAGGATTTCTTGCTCTATACCAAGACCCTAATTTTGAGCTCTTAGCTTTTTT
TTTTTTTTTAATGCCACAGGTCAACACAGTGTGTTTATAAATGCTTTTATAACCTCATAG
CTTCTGCTTCTTTATAATTTTGACCATGTGGGAAATATACTGTATGGGAAACCTACCACG
TATTTCCCATGTGGTATGAAACATGAATGTGTAGTATTAGCCATTCAGCTTGGCCTGAGA
TTGGCAGTTTTCCTTGGGTACTATTTAAAACTAGGTCACAGTTTTGAATAGAATTATAGA
GATTAGAATACA------------------------------------------------
------------------------------------------------------------
------------------------AAAAAAGTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTGATAGCCCTATTCTAATTTCTGAGAAGACAGATTTACTAGGCCTGACTTATCCTAG
TGTTTAGTTAGATGTTTATATACCAACAGCAGCAGTTTGTGGGTCTTTTGTGTTCTATTT
AGTCTCTGCCTCTCTTACTTCATTTCTTCTAGTTTCCAATGCATCCATTAATAACTGGCT
TTTCCATCCTTTATTTCAGGGGTTGCAGTTGTAAATGCCTGCAGGTTTCAGTTCTGTAAG
ATAGTTCTGATATTTATTTTCTTTATTTCTTGAAACACTGCTGTGTTTTTGTTTTCTTTT
CTACTTTTGATAGACATTGGAAAAGAGAATACTCTTAAAAAAACAAAAGATTTCAAATGC
AATGGTAAAGAGAAGTTGATGCTTCTAAGAGAGAGTGTTTGGGTTTAAGGTCCACTGGAA
CATGAGCCTTTAATCTGTAGGAGAAGGCTATTACTCCTTGGCTCCTGTTGATTGTTGCCC
AATATTGACAGGATTTCTTGCTCTATACCAAGACCCTAATTTTGAGCTCTTAGCTTTTTT
TTTTTTTTTAATGCCACAGGTCAACACAGTGTGTTTATAAATGCTTTTATAACCTCATAG
CTTCTGCTTCTTTATAATTTTGACCATGTGGGAAATATACTGTATGGGAAACCTACCACG
TATTTCCCATGTGGTATGAAACATGAATGTGTAGTATTAGCCATTCAGCTTGGCCTGAGA
TTGGCAGTTTTCCTTGGGTACTATTTAAAACTAGGTCACAGTTTTGAATAGAATTATAGA
GATTAGAATACA------------------------------------------------
------------------------------------------------------------
------------------------AAAAAAGTGGGG

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               39-223, gnl|bosTau2|chr24 (5981248-5981438)
               

               
               39-223, gnl|Hg17|chrX (73271392-73271171)
               


               
               237-434, gnl|bosTau2|chr24 (5981479-5981682)
               

               
               237-434, gnl|Hg17|chrX (73271148-73270930)
               


               
               454-623, gnl|bosTau2|chr24 (5981744-5981923)
               

               
               454-623, gnl|Hg17|chrX (73270857-73270605)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-223, gnl|bosTau2|chr24 (5981248-5981438)
               

               
               39-223, gnl|Hg17|chrX (73271392-73271171)
               


               
               237-434, gnl|bosTau2|chr24 (5981479-5981682)
               

               
               237-434, gnl|Hg17|chrX (73271148-73270930)
               


               
               454-623, gnl|bosTau2|chr24 (5981744-5981923)
               

               
               454-623, gnl|Hg17|chrX (73270857-73270605)

	39-223, gnl\|bosTau2\|chr24 (5981248-5981438)
	39-223, gnl\|Hg17\|chrX (73271392-73271171)

	237-434, gnl\|bosTau2\|chr24 (5981479-5981682)
	237-434, gnl\|Hg17\|chrX (73271148-73270930)

	454-623, gnl\|bosTau2\|chr24 (5981744-5981923)
	454-623, gnl\|Hg17\|chrX (73270857-73270605)