Non-Coding RNA Search

Ss1.1-Pig4-TMW8022I03.5

Sequence:


               
               GAAACTAAGACTTTAAGAAACTGTATGAGATTGTGTCTTTCTTTTAACTCTTCATTTTCT
TCAGTCACCTTGAAAAGGGCACATGATATCCTGACTCTCAAAAAGTATTTGCAGATGTGG
GCAGTGTTTCTAGAAAGGGTATACATTTTAGCTATAGAAGCGTCAGTTCCTTAGTATCTC
TTTGCTTATATGTCTACTCTGTTTTGTTGATGGCTCTTTTTGGTGGTTGGTCAGTAGATC
TGCATATCTTTACACACACATTTTTTTCCAAGCTTAGTGCTTATTTTTTTTATATTAAAA
AAACCATAAAACTTCACTAACAGTGACAACTCAGCCACCCAGAACATAAATTGATTGGAG
TATTAAATATCATGTATCTTATTAATAACTAGGAGAGTTCTTTAGTTTTTCCTCAGAACC
TCTTTTTCCTCAGGATAATCAGTTCTACCTATCATAAATCATTCTACCCCAGAGGAAATT
AGAAACAACAAAACAGGAGACATTTAGTTAGCCAGAAGAGTATAAACTACCTGACAGCCT
GACAACCATAGAAGAGAAAGGGAGGACAACATAAAGACAGGAGAACATTAAAAAAAGAAA
TATCAGTCTCTTACCATTTTGTATAGGAATTTGTAGTCTCAAAGGGCTTTATTATGTAAC
AAAGGCTTAAGTTACCAGTAATAGGTAAGTTTAAGAACAGTGGATTCTAACATAACAGGA
AACAGTATAATCTATTTTAGATTCAGGTCCACCAGAACTGCCAAAACTAAAATATTTAAA
TATTTAATATATGTAATTTAATTATCAGGATAATTTATTTAACATGAGATCCTTCATTCT
GCCAACTACATAGGATAAATTGAGGTGCCATGTATAGATTTATACATATCTCATCTTGCC
CCCCACTTCTGCCAGTGTAAAAGAATTTCCTGATAAAAATCTCATTGAAAACAAAATCAA
ACTGTTTTCAAGTGGGATGGGGGTTTTGTTTGAATTTTGAACTCCGTTATTACCTTTCAT
GTATTTGTGAAAAATAAGTCATGTTCCTCAGATCTCCATTTATTTATTTTTTTAATTAAT
TTTTTGATTGCA------------------------------------------------
------------------------------------------------------------
------------------------------------------------GCTGGATCCTTA
ACCCACTGTGCCACAGTGGGAACTCCCTCAGATTTCCTTTTGGACAAAATCCAAGAGTAG
CATGCCAATTAAAGACCAAAACTGTTTCTGTGGTGTTCTGTTAAATTCAATATATATTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAACTAAGACTTTAAGAAACTGTATGAGATTGTGTCTTTCTTTTAACTCTTCATTTTCT
TCAGTCACCTTGAAAAGGGCACATGATATCCTGACTCTCAAAAAGTATTTGCAGATGTGG
GCAGTGTTTCTAGAAAGGGTATACATTTTAGCTATAGAAGCGTCAGTTCCTTAGTATCTC
TTTGCTTATATGTCTACTCTGTTTTGTTGATGGCTCTTTTTGGTGGTTGGTCAGTAGATC
TGCATATCTTTACACACACATTTTTTTCCAAGCTTAGTGCTTATTTTTTTTATATTAAAA
AAACCATAAAACTTCACTAACAGTGACAACTCAGCCACCCAGAACATAAATTGATTGGAG
TATTAAATATCATGTATCTTATTAATAACTAGGAGAGTTCTTTAGTTTTTCCTCAGAACC
TCTTTTTCCTCAGGATAATCAGTTCTACCTATCATAAATCATTCTACCCCAGAGGAAATT
AGAAACAACAAAACAGGAGACATTTAGTTAGCCAGAAGAGTATAAACTACCTGACAGCCT
GACAACCATAGAAGAGAAAGGGAGGACAACATAAAGACAGGAGAACATTAAAAAAAGAAA
TATCAGTCTCTTACCATTTTGTATAGGAATTTGTAGTCTCAAAGGGCTTTATTATGTAAC
AAAGGCTTAAGTTACCAGTAATAGGTAAGTTTAAGAACAGTGGATTCTAACATAACAGGA
AACAGTATAATCTATTTTAGATTCAGGTCCACCAGAACTGCCAAAACTAAAATATTTAAA
TATTTAATATATGTAATTTAATTATCAGGATAATTTATTTAACATGAGATCCTTCATTCT
GCCAACTACATAGGATAAATTGAGGTGCCATGTATAGATTTATACATATCTCATCTTGCC
CCCCACTTCTGCCAGTGTAAAAGAATTTCCTGATAAAAATCTCATTGAAAACAAAATCAA
ACTGTTTTCAAGTGGGATGGGGGTTTTGTTTGAATTTTGAACTCCGTTATTACCTTTCAT
GTATTTGTGAAAAATAAGTCATGTTCCTCAGATCTCCATTTATTTATTTTTTTAATTAAT
TTTTTGATTGCA------------------------------------------------
------------------------------------------------------------
------------------------------------------------GCTGGATCCTTA
ACCCACTGTGCCACAGTGGGAACTCCCTCAGATTTCCTTTTGGACAAAATCCAAGAGTAG
CATGCCAATTAAAGACCAAAACTGTTTCTGTGGTGTTCTGTTAAATTCAATATATATTAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               2-975, gnl|bosTau2|chr5 (47065111-47064164)
               

               
               2-975, gnl|Hg17|chr12 (32747209-32748213)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-975, gnl|bosTau2|chr5 (47065111-47064164)
               

               
               2-975, gnl|Hg17|chr12 (32747209-32748213)

	2-975, gnl\|bosTau2\|chr5 (47065111-47064164)
	2-975, gnl\|Hg17\|chr12 (32747209-32748213)