Non-Coding RNA Search

Ss1.1-Pig4-TMW8023G22.5

Sequence:


               
               TTCTCTTCTTCCTCACCAGCCTCCAGCTGGAATGAACCACCACCACGGGCCCGGCCGAGG
CGCCCCTGCTGAGGAGCCAGTGGGCGGGGGCCTGGCTCACCTTGCTGATGTGGGTTCATG
TCCTGGATCCTTGCAGCTCGGGCAGATGAGCAGCCCCACTCCGGATGGACATGTGTTCCC
CCCTACCCACTTCCAGCCAGCGTTTATTCCTCCCAGGCTCAGTGGGGCTCCGGCCCGACC
CCCAGACTTTCCTGAGAGCTCAGAAATCTCTCCCAGCCATGTGTACCGGCCCTACAAGTA
CCTGAACCGAGTACACCCTGCGGTCTGGAATGGGAACCACGGTGCTGCCAACTCAGGACC
CTTGGGGCCAGACGAGAAGACCCCCATGGGGCCAGGACCCTCACACCAGCCTCGCACGTT
GGGTCCCGTGATGGATTCCCGGGTGCTGAGGCCACCCCTCCCCCCACACCCATGGACTGA
ACAATCAGGCTTTCTACCTCACGGAGTTCCTTCTCCCGGATACATGCGACCACCCTGTAA
ATCTGGTGGACATCGATTACAGCCACCTCCCGGCCCGGCGGCAGGGTCTCTGTTCGGAGC
GCCGGCCCAGGCCCTGCGGGGGGTGCCGAGTGGAGACTCCATGATGGACAGCCCGGAGAT
GATCGCCATGCAGCAGCTCTCCTCCAGCGTGGGCCCACCAGGTGCGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTCTTCTTCCTCACCAGCCTCCAGCTGGAATGAACCACCACCACGGGCCCGGCCGAGG
CGCCCCTGCTGAGGAGCCAGTGGGCGGGGGCCTGGCTCACCTTGCTGATGTGGGTTCATG
TCCTGGATCCTTGCAGCTCGGGCAGATGAGCAGCCCCACTCCGGATGGACATGTGTTCCC
CCCTACCCACTTCCAGCCAGCGTTTATTCCTCCCAGGCTCAGTGGGGCTCCGGCCCGACC
CCCAGACTTTCCTGAGAGCTCAGAAATCTCTCCCAGCCATGTGTACCGGCCCTACAAGTA
CCTGAACCGAGTACACCCTGCGGTCTGGAATGGGAACCACGGTGCTGCCAACTCAGGACC
CTTGGGGCCAGACGAGAAGACCCCCATGGGGCCAGGACCCTCACACCAGCCTCGCACGTT
GGGTCCCGTGATGGATTCCCGGGTGCTGAGGCCACCCCTCCCCCCACACCCATGGACTGA
ACAATCAGGCTTTCTACCTCACGGAGTTCCTTCTCCCGGATACATGCGACCACCCTGTAA
ATCTGGTGGACATCGATTACAGCCACCTCCCGGCCCGGCGGCAGGGTCTCTGTTCGGAGC
GCCGGCCCAGGCCCTGCGGGGGGTGCCGAGTGGAGACTCCATGATGGACAGCCCGGAGAT
GATCGCCATGCAGCAGCTCTCCTCCAGCGTGGGCCCACCAGGTGCGCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               95-214, - strand, RNAz p=0.765635

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               95-214, - strand, RNAz p=0.765635

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               16-708, gnl|bosTau2|chr5 (66341036-66340344)
               

               
               16-708, gnl|Hg17|chr22 (16396396-16397088)
               

               
               16-708, gnl|Mm7|chr6 (120783112-120783774)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-708, gnl|bosTau2|chr5 (66341036-66340344)
               

               
               16-708, gnl|Hg17|chr22 (16396396-16397088)
               

               
               16-708, gnl|Mm7|chr6 (120783112-120783774)

	16-708, gnl\|bosTau2\|chr5 (66341036-66340344)
	16-708, gnl\|Hg17\|chr22 (16396396-16397088)
	16-708, gnl\|Mm7\|chr6 (120783112-120783774)