Ss1.1-Pig4-TMW8024K03.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGGCTTGGCTTTCCCTCTGCATATGATGTCGTGTCCTCATGCCACTGGTGAAAGCTCA TTGGCTCAAACCCCATCCGGGACCCTCCGTAGCAGAAATTCACAACACTTTAGAGGCTCT AAGCTTCTGTAGCTCAGGAACGAAACGCGTACATTTGTCTTTTGTTTGTTTGCTTGGGCT CTCGTGAGAACGCAGGGTTGCGATGGGGGCTGTTCCAGCAGGCGCTGGTCTCATTGTCAC CCCTGGGCTTCTTTGCTGTGATGACGTTTGCATTTCAACCCATGACCTATCCAGATTGTT TTCCCCTTACTGTTTCAATGACATTTATTTTAAAAACACGTAGCTTGAAAATTTATTTTT GTACTGATATTAGTTCAGGTGTGCCACTTTTGGCACCAAACCTGTATGTCATTTTTATTT CTGTTTTATAAACATGTAAATAATAGTGATAACTTGTTAATAATAGTAAACATTTATACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGGCTTGGCTTTCCCTCTGCATATGATGTCGTGTCCTCATGCCACTGGTGAAAGCTCA TTGGCTCAAACCCCATCCGGGACCCTCCGTAGCAGAAATTCACAACACTTTAGAGGCTCT AAGCTTCTGTAGCTCAGGAACGAAACGCGTACATTTGTCTTTTGTTTGTTTGCTTGGGCT CTCGTGAGAACGCAGGGTTGCGATGGGGGCTGTTCCAGCAGGCGCTGGTCTCATTGTCAC CCCTGGGCTTCTTTGCTGTGATGACGTTTGCATTTCAACCCATGACCTATCCAGATTGTT TTCCCCTTACTGTTTCAATGACATTTATTTTAAAAACACGTAGCTTGAAAATTTATTTTT GTACTGATATTAGTTCAGGTGTGCCACTTTTGGCACCAAACCTGTATGTCATTTTTATTT CTGTTTTATAAACATGTAAATAATAGTGATAACTTGTTAATAATAGTAAACATTTATACC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 336-479, + strand, RNAz p=0.912871 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 336-479, + strand, RNAz p=0.912871 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of AK025541, + |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 5-272, gnl|bosTau2|chr13 (43487167-43486913) | |
| 5-272, gnl|canFam2|chr24 (30366157-30366356) | |
| 5-272, gnl|echTel1|scaffold_308366 (126188-126357) | |
| 5-272, gnl|hg17|chr20 (37101242-37101445) | |
| 5-272, gnl|Hg17|chr20 (37101274-37101547) | |
| 5-272, gnl|mm7|chr2 (158598613-158598805) | |
| 5-272, gnl|Mm7|chr2 (158598639-158598906) | |
| 5-272, gnl|monDom2|scaffold_6 (3462222-3462439) | |
| 5-272, gnl|oryCun1|scaffold_214075 (6568-6384) | |
| 5-272, gnl|panTro1|chr21_random (11495098-11494895) | |
| 5-272, gnl|rheMac2|chr10 (25405074-25404873) | |
| 5-272, gnl|rn3|chr3 (149495097-149495287) | |
| 336-479, gnl|bosTau2|chr13 (43486911-43486768) | |
| 336-479, gnl|canFam2|chr24 (30366532-30366700) | |
| 336-479, gnl|dasNov1|scaffold_166583 (1479-1340) | |
| 336-479, gnl|echTel1|scaffold_308366 (126529-126672) | |
| 336-479, gnl|hg17|chr20 (37101625-37101793) | |
| 336-479, gnl|Hg17|chr20 (37101611-37101754) | |
| 336-479, gnl|loxAfr1|scaffold_8511 (6057-5892) | |
| 336-479, gnl|mm7|chr2 (158598969-158599132) | |
| 336-479, gnl|Mm7|chr2 (158598908-158599095) | |
| 336-479, gnl|monDom2|scaffold_6 (3462643-3462814) | |
| 336-479, gnl|oryCun1|scaffold_214075 (6213-6049) | |
| 336-479, gnl|panTro1|chr21_random (11494715-11494495) | |
| 336-479, gnl|rheMac2|chr10 (25404692-25404524) | |
| 336-479, gnl|rn3|chr3 (149495453-149495616) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-272, gnl|bosTau2|chr13 (43487167-43486913) | |
| 5-272, gnl|canFam2|chr24 (30366157-30366356) | |
| 5-272, gnl|echTel1|scaffold_308366 (126188-126357) | |
| 5-272, gnl|hg17|chr20 (37101242-37101445) | |
| 5-272, gnl|Hg17|chr20 (37101274-37101547) | |
| 5-272, gnl|mm7|chr2 (158598613-158598805) | |
| 5-272, gnl|Mm7|chr2 (158598639-158598906) | |
| 5-272, gnl|monDom2|scaffold_6 (3462222-3462439) | |
| 5-272, gnl|oryCun1|scaffold_214075 (6568-6384) | |
| 5-272, gnl|panTro1|chr21_random (11495098-11494895) | |
| 5-272, gnl|rheMac2|chr10 (25405074-25404873) | |
| 5-272, gnl|rn3|chr3 (149495097-149495287) | |
| 336-479, gnl|bosTau2|chr13 (43486911-43486768) | |
| 336-479, gnl|canFam2|chr24 (30366532-30366700) | |
| 336-479, gnl|dasNov1|scaffold_166583 (1479-1340) | |
| 336-479, gnl|echTel1|scaffold_308366 (126529-126672) | |
| 336-479, gnl|hg17|chr20 (37101625-37101793) | |
| 336-479, gnl|Hg17|chr20 (37101611-37101754) | |
| 336-479, gnl|loxAfr1|scaffold_8511 (6057-5892) | |
| 336-479, gnl|mm7|chr2 (158598969-158599132) | |
| 336-479, gnl|Mm7|chr2 (158598908-158599095) | |
| 336-479, gnl|monDom2|scaffold_6 (3462643-3462814) | |
| 336-479, gnl|oryCun1|scaffold_214075 (6213-6049) | |
| 336-479, gnl|panTro1|chr21_random (11494715-11494495) | |
| 336-479, gnl|rheMac2|chr10 (25404692-25404524) | |
| 336-479, gnl|rn3|chr3 (149495453-149495616) |