Non-Coding RNA Search

Ss1.1-Pig4-TMW8024N04.3

Sequence:


               
               TGAAACCATAAAACTCCTAGAAGAGAACAGAGATGAAAATCTCTGACATAAATCGTAACA
GTGTTTTTTTTTGTTTTGTTTTGTTTTTTTGTCTTT------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AATGACAGTAACTCCCCATAGTAGTATTTTCTTGAT
CAGTCCCCTCCCAAGGCAAAATAAATAAAAGCAAAAGTAAATAAATTGGATCTAAGTAAA
TTTAAATGCTTTTACACAGCAAAGGAAACCATAAACAAAATGAAAAGCCATCCTGTAGAG
TACAAGAAAATATTGCAAGTGATGAGACCAACAAGGAATTAATATCCAGAATATACGGAC
AGCTCATACAATTCAATATTAAAAAAATAAACTCCAAGAAATAGCAAAAAAAGACCAAAA
AAAACCCCAAAAAGACAACTTACGGAATTGAGAAAATAGTTTTAAACAATGCAGCTGATG
AGGACTTAATCTTTAAAATATACAAGCATTTTATACAACTCAACAGCAAAAAGACAAAAA
AAAAAAAAAAAAAAAAAAAGCGGTATGGTATTGCACACACACAATGGAACATTACTCAGC
TGTAAGAAAGACTCAAACTGTCATTTGCAGGAACATGGATGGACATAGAGAATGCTTAGT
GAAATAAGTCAGAGGAAGACAGAGTAACTCTATGATATCACTTACACATGGAATCTGAAA
AATAATGCAAATGAATAGATATACAAAGCAGGAATAGACTCAGAGATACAAAAACAAACC
TGCTTATAAAAAAGAGAAGGGGGAAAGGACAGATTAGTTGTATGAGATTAACAGATAGCA
ATTACCATATATAAAATAGATAAGCAGCAGGGTTTAATGTATAGCACAGGGAATTATACC
TCTTGTAACAACCTGTAATGGAATGTAATCTGTAAAAATACTCAATCACTATGCTGTACA
CCTGGAACTGATACAGTATTGTAAATTATACCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAACCATAAAACTCCTAGAAGAGAACAGAGATGAAAATCTCTGACATAAATCGTAACA
GTGTTTTTTTTTGTTTTGTTTTGTTTTTTTGTCTTT------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AATGACAGTAACTCCCCATAGTAGTATTTTCTTGAT
CAGTCCCCTCCCAAGGCAAAATAAATAAAAGCAAAAGTAAATAAATTGGATCTAAGTAAA
TTTAAATGCTTTTACACAGCAAAGGAAACCATAAACAAAATGAAAAGCCATCCTGTAGAG
TACAAGAAAATATTGCAAGTGATGAGACCAACAAGGAATTAATATCCAGAATATACGGAC
AGCTCATACAATTCAATATTAAAAAAATAAACTCCAAGAAATAGCAAAAAAAGACCAAAA
AAAACCCCAAAAAGACAACTTACGGAATTGAGAAAATAGTTTTAAACAATGCAGCTGATG
AGGACTTAATCTTTAAAATATACAAGCATTTTATACAACTCAACAGCAAAAAGACAAAAA
AAAAAAAAAAAAAAAAAAAGCGGTATGGTATTGCACACACACAATGGAACATTACTCAGC
TGTAAGAAAGACTCAAACTGTCATTTGCAGGAACATGGATGGACATAGAGAATGCTTAGT
GAAATAAGTCAGAGGAAGACAGAGTAACTCTATGATATCACTTACACATGGAATCTGAAA
AATAATGCAAATGAATAGATATACAAAGCAGGAATAGACTCAGAGATACAAAAACAAACC
TGCTTATAAAAAAGAGAAGGGGGAAAGGACAGATTAGTTGTATGAGATTAACAGATAGCA
ATTACCATATATAAAATAGATAAGCAGCAGGGTTTAATGTATAGCACAGGGAATTATACC
TCTTGTAACAACCTGTAATGGAATGTAATCTGTAAAAATACTCAATCACTATGCTGTACA
CCTGGAACTGATACAGTATTGTAAATTATACCCCCA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               113-377, gnl|bosTau2|chr1 (42554306-42554565)
               

               
               113-377, gnl|hg17|chr11 (84408287-84409239)
               

               
               113-377, gnl|Hg17|chr11 (84409229-84408969)
               

               
               113-377, gnl|panTro1|chr9 (85867329-85868282)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               113-377, gnl|bosTau2|chr1 (42554306-42554565)
               

               
               113-377, gnl|hg17|chr11 (84408287-84409239)
               

               
               113-377, gnl|Hg17|chr11 (84409229-84408969)
               

               
               113-377, gnl|panTro1|chr9 (85867329-85868282)

	113-377, gnl\|bosTau2\|chr1 (42554306-42554565)
	113-377, gnl\|hg17\|chr11 (84408287-84409239)
	113-377, gnl\|Hg17\|chr11 (84409229-84408969)
	113-377, gnl\|panTro1\|chr9 (85867329-85868282)