Non-Coding RNA Search

Ss1.1-Pig4-TMW8025D03.5

Sequence:


               
               GGCTCGAGCCCTGCTCTTGAAAGGTGCACACAGACTTTCACATGCACTGGGTCCCAGGGC
AAAGCAAAGGCTTCATAGGAATCTGGGTTGGACTTGACTGCAGTTCTTGGTGGATCTCCT
GGGAAAACAGGTGAATGGCTTGTTGTGGGGGAAGGGCATTGGAGGCAAAGCTCTTGGAAA
GTGTGTGTTTCTCTGGAGGTGGCCATTTTGGGAGAATCTGGCCCCATCCATCAGTAAACA
GGCTGCCCAAAGAACCCCGTGGTACACAGCCACCTCTAACCTCACCCAGAGACAAAGCCC
CACTCACCAGAGGGATAGGAATCAGCCCCACCTACCAGTGGGCCGGCACCAGCCCCTCCC
ATCAGGAAGCCTACAGCAAGCCCCTGTACCAATTTCAGCCACAAGAGGGCCAGACACCAG
AAGTAAGAGGCTATAACTCTATTGTATGCAAAAAGGTCACCACACCAAAAACCTATAAAA
ATTCATTAGAAGCAGGCAACAGCAGAATACAGGAGGCAGAAGAATGAATCAGTGAGGTGG
AGGACAGATTAGTAGAAATTACGAATGAGGAACAGAAATGAGAAAAAAGATTGAAAAGAA
ATGAAGAGAGTCTCAGAGAACTCTGGGACAACGTTAAACACCCCAACATCCGTAGTATAG
GGGTGCCAGAAGGAAAAGAGAGAGAGAAAGAGACAGAAAAAATATTCGAAGAGATAATAG
CCGAAAACTACCCTAACATGGGAAAGGAACCACCCACTCAAATCCAGGAAGTGCAACGAA
TACCATATAAAATAAACCCAAGGAGGACCATCCCAAGACACATATTAATCAAACTGACCA
AAAATTAAAGAC------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------GCATGATAGTGGGAGAAAAAATTA
TGTATGCATGTGTATGTAACTGGCTCCCCATGCTGTATAGTGGGAAAAAAAGTGTGTTGG
GGGAAATAACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTCGAGCCCTGCTCTTGAAAGGTGCACACAGACTTTCACATGCACTGGGTCCCAGGGC
AAAGCAAAGGCTTCATAGGAATCTGGGTTGGACTTGACTGCAGTTCTTGGTGGATCTCCT
GGGAAAACAGGTGAATGGCTTGTTGTGGGGGAAGGGCATTGGAGGCAAAGCTCTTGGAAA
GTGTGTGTTTCTCTGGAGGTGGCCATTTTGGGAGAATCTGGCCCCATCCATCAGTAAACA
GGCTGCCCAAAGAACCCCGTGGTACACAGCCACCTCTAACCTCACCCAGAGACAAAGCCC
CACTCACCAGAGGGATAGGAATCAGCCCCACCTACCAGTGGGCCGGCACCAGCCCCTCCC
ATCAGGAAGCCTACAGCAAGCCCCTGTACCAATTTCAGCCACAAGAGGGCCAGACACCAG
AAGTAAGAGGCTATAACTCTATTGTATGCAAAAAGGTCACCACACCAAAAACCTATAAAA
ATTCATTAGAAGCAGGCAACAGCAGAATACAGGAGGCAGAAGAATGAATCAGTGAGGTGG
AGGACAGATTAGTAGAAATTACGAATGAGGAACAGAAATGAGAAAAAAGATTGAAAAGAA
ATGAAGAGAGTCTCAGAGAACTCTGGGACAACGTTAAACACCCCAACATCCGTAGTATAG
GGGTGCCAGAAGGAAAAGAGAGAGAGAAAGAGACAGAAAAAATATTCGAAGAGATAATAG
CCGAAAACTACCCTAACATGGGAAAGGAACCACCCACTCAAATCCAGGAAGTGCAACGAA
TACCATATAAAATAAACCCAAGGAGGACCATCCCAAGACACATATTAATCAAACTGACCA
AAAATTAAAGAC------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------GCATGATAGTGGGAGAAAAAATTA
TGTATGCATGTGTATGTAACTGGCTCCCCATGCTGTATAGTGGGAAAAAAAGTGTGTTGG
GGGAAATAACAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               354-852, gnl|bosTau2|chr1 (40307587-40308079)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               354-852, gnl|bosTau2|chr1 (40307587-40308079)