Ss1.1-Pig4-TMW8025G08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGAGAGAGAGGATTTAGCATGTGTTAAGGCTCTGTTAACAGATTCGCTTTCTTTGGAG AATGGTACGTAACATCGAAATGCTCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCGCCGG GACCTGCTCGGCCCCCGGGACGCCCCTGCCCCCGCCTGCAGCCTCCGCCGACGGGACTGT CCGGAGGACATGTATTCCTCTGAGAAACGCTGGACAGCAGATTTGGGTTTGGTACCTGAT CCGGACCACAGACAGAGCCACCTCCAGCCATGGATTCAGACCAGGATGTAGCACTCAAAC TTGCCCAGGAACGAGCTGAAATAGTTGCTAAATATGACAGAGGACGCGAAGGCGCAGAGA TCGAGCCTTGGGAAGATGCCAATTACCTGGTTTACAGAGTCACGGATCGATTTGGCTTCT TACATGAAGAGGAGCTCCCCTCTCACAACGCGGCTATGGAGCGGCAAAAGCACCTGGAAA TTGAAAGAACTACTAAATGGCTAAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTG AAAAGTTTCATAGGAGAATTTACAAAGGAATCCCACTCCAGCTCAGAGGTGAAGTCTGGG CTCTACTCCTGGAGATCCCGAAAATGAAGGAAGAAACAAGAGACCTTTATAGTAAATTAA AGCACAGAGCCCGGGGCTGCTCACCAGATATCAGACAAATAGACCTTGATGTCAACCGCA CATTTAGGGACCATATCATGTTTCGAGACAGATACGGTGTTAAGCAACAATCCCTGTTCC ATGTCCTTGCTGCATATTCTATTTATAACACGGAAGTTGGATACTGTCAGGGCATGAGCC AGATCACAGCTTTACTCCTCATGTATATGAATGAAGAAGATGCCTTCTGGGCCCTGGTCA AACTGTTCTCGGGCCCCAAACATGCCATGCATGGGTTTTTTGTCCATGGTTTTCCCAAAC TCTTGAGGTTTCAAGAACATCATGAAAAAATACTGAATAAATTTTTGTCCAAGCTTAAGC AGCACTTGGACTCTCAAGAAATCTACACAAGTTTTTACACAATGAAGTGGTTTTTTCAAT GTTTCCTTGATCGTACTCCCTTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGAGAGAGAGGATTTAGCATGTGTTAAGGCTCTGTTAACAGATTCGCTTTCTTTGGAG AATGGTACGTAACATCGAAATGCTCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCGCCGG GACCTGCTCGGCCCCCGGGACGCCCCTGCCCCCGCCTGCAGCCTCCGCCGACGGGACTGT CCGGAGGACATGTATTCCTCTGAGAAACGCTGGACAGCAGATTTGGGTTTGGTACCTGAT CCGGACCACAGACAGAGCCACCTCCAGCCATGGATTCAGACCAGGATGTAGCACTCAAAC TTGCCCAGGAACGAGCTGAAATAGTTGCTAAATATGACAGAGGACGCGAAGGCGCAGAGA TCGAGCCTTGGGAAGATGCCAATTACCTGGTTTACAGAGTCACGGATCGATTTGGCTTCT TACATGAAGAGGAGCTCCCCTCTCACAACGCGGCTATGGAGCGGCAAAAGCACCTGGAAA TTGAAAGAACTACTAAATGGCTAAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTG AAAAGTTTCATAGGAGAATTTACAAAGGAATCCCACTCCAGCTCAGAGGTGAAGTCTGGG CTCTACTCCTGGAGATCCCGAAAATGAAGGAAGAAACAAGAGACCTTTATAGTAAATTAA AGCACAGAGCCCGGGGCTGCTCACCAGATATCAGACAAATAGACCTTGATGTCAACCGCA CATTTAGGGACCATATCATGTTTCGAGACAGATACGGTGTTAAGCAACAATCCCTGTTCC ATGTCCTTGCTGCATATTCTATTTATAACACGGAAGTTGGATACTGTCAGGGCATGAGCC AGATCACAGCTTTACTCCTCATGTATATGAATGAAGAAGATGCCTTCTGGGCCCTGGTCA AACTGTTCTCGGGCCCCAAACATGCCATGCATGGGTTTTTTGTCCATGGTTTTCCCAAAC TCTTGAGGTTTCAAGAACATCATGAAAAAATACTGAATAAATTTTTGTCCAAGCTTAAGC AGCACTTGGACTCTCAAGAAATCTACACAAGTTTTTACACAATGAAGTGGTTTTTTCAAT GTTTCCTTGATCGTACTCCCTTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 62 entry(ies) | More info |
| Aligned organism(s): 62 entry(ies) | Help | Less info |
| 543-653, gnl|bosTau2|chr13 (5514857-5514967) | |
| 543-653, gnl|canFam2|chr2 (27691418-27691242) | |
| 543-653, gnl|danRer3|chr4 (26987561-26987393) | |
| 543-653, gnl|dasNov1|scaffold_1749 (146442-146271) | |
| 543-653, gnl|echTel1|scaffold_211120 (16549-16718) | |
| 543-653, gnl|fr1|chrUn (6503477-6503622) | |
| 543-653, gnl|galGal2|chr1 (4226924-4226757) | |
| 543-653, gnl|hg17|chr10 (11583100-11583273) | |
| 543-653, gnl|Hg17|chr10 (11583216-11583106) | |
| 543-653, gnl|mm7|chr2 (6332321-6332147) | |
| 543-653, gnl|Mm7|chr2 (6332203-6332313) | |
| 543-653, gnl|monDom2|scaffold_30 (10163551-10163720) | |
| 543-653, gnl|oryCun1|scaffold_198301 (120157-119984) | |
| 543-653, gnl|panTro1|chr8 (11725396-11725569) | |
| 543-653, gnl|rheMac2|chr9 (11745164-11745337) | |
| 543-653, gnl|rn3|chr17 (83171783-83171956) | |
| 654-767, gnl|bosTau2|chr13 (5518597-5518710) | |
| 654-767, gnl|canFam2|chr2 (27697380-27697264) | |
| 654-767, gnl|canFam2|chr9 (51111212-51111310) | |
| 654-767, gnl|danRer3|chr4 (26989793-26989677) | |
| 654-767, gnl|dasNov1|scaffold_163867 (3721-3831) | |
| 654-767, gnl|echTel1|scaffold_211120 (11045-11161) | |
| 654-767, gnl|fr1|chrUn (103989503-103989384) | |
| 654-767, gnl|fr1|chrUn (103989383-103989498) | |
| 654-767, gnl|galGal2|chr1 (4229643-4229527) | |
| 654-767, gnl|hg17|chr10 (11575118-11575234) | |
| 654-767, gnl|Hg17|chr10 (11575233-11575120) | |
| 654-767, gnl|hg17|chr17 (25908013-25908132) | |
| 654-767, gnl|loxAfr1|scaffold_1611 (100808-100692) | |
| 654-767, gnl|mm7|chr2 (6338172-6338291) | |
| 654-767, gnl|mm7|chr2 (6338293-6338177) | |
| 654-767, gnl|Mm7|chr2 (6338176-6338289) | |
| 654-767, gnl|monDom2|scaffold_30 (10156355-10156471) | |
| 654-767, gnl|oryCun1|scaffold_176922 (43988-44107) | |
| 654-767, gnl|oryCun1|scaffold_198301 (127081-126965) | |
| 654-767, gnl|panTro1|chr19 (20738832-20738733) | |
| 654-767, gnl|panTro1|chr8 (11717453-11717569) | |
| 654-767, gnl|rheMac2|chr1 (210516006-210516125) | |
| 654-767, gnl|rheMac2|chr9 (11733626-11733742) | |
| 654-767, gnl|rn3|chr17 (83165808-83165689) | |
| 654-767, gnl|rn3|chr17 (83165687-83165803) | |
| 654-767, gnl|tetNig1|chrUn_random (29955312-29955431) | |
| 654-767, gnl|tetNig1|chrUn_random (29955432-29955317) | |
| 654-767, gnl|xenTro1|scaffold_314 (233460-233344) | |
| 812-934, gnl|bosTau2|chr13 (5522652-5522774) | |
| 812-934, gnl|canFam2|chr2 (27701479-27701311) | |
| 812-934, gnl|danRer3|chr4 (26993204-26993052) | |
| 812-934, gnl|dasNov1|scaffold_9339 (44503-44672) | |
| 812-934, gnl|fr1|chrUn (103987926-103988074) | |
| 812-934, gnl|galGal2|chr1 (4233809-4233659) | |
| 812-934, gnl|hg17|chr10 (11571085-11571254) | |
| 812-934, gnl|Hg17|chr10 (11571228-11571106) | |
| 812-934, gnl|loxAfr1|scaffold_19882 (8688-8854) | |
| 812-934, gnl|mm7|chr2 (6341689-6341529) | |
| 812-934, gnl|Mm7|chr2 (6341544-6341666) | |
| 812-934, gnl|monDom2|scaffold_30 (10153709-10153880) | |
| 812-934, gnl|oryCun1|scaffold_198301 (131123-130959) | |
| 812-934, gnl|panTro1|chr8 (11713428-11713597) | |
| 812-934, gnl|rheMac2|chr9 (11729624-11729793) | |
| 812-934, gnl|rn3|chr17 (83162501-83162668) | |
| 812-934, gnl|tetNig1|chrUn_random (29955768-29955628) | |
| 812-934, gnl|xenTro1|scaffold_314 (236698-236525) |
| Aligned organism(s): 62 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 543-653, gnl|bosTau2|chr13 (5514857-5514967) | |
| 543-653, gnl|canFam2|chr2 (27691418-27691242) | |
| 543-653, gnl|danRer3|chr4 (26987561-26987393) | |
| 543-653, gnl|dasNov1|scaffold_1749 (146442-146271) | |
| 543-653, gnl|echTel1|scaffold_211120 (16549-16718) | |
| 543-653, gnl|fr1|chrUn (6503477-6503622) | |
| 543-653, gnl|galGal2|chr1 (4226924-4226757) | |
| 543-653, gnl|hg17|chr10 (11583100-11583273) | |
| 543-653, gnl|Hg17|chr10 (11583216-11583106) | |
| 543-653, gnl|mm7|chr2 (6332321-6332147) | |
| 543-653, gnl|Mm7|chr2 (6332203-6332313) | |
| 543-653, gnl|monDom2|scaffold_30 (10163551-10163720) | |
| 543-653, gnl|oryCun1|scaffold_198301 (120157-119984) | |
| 543-653, gnl|panTro1|chr8 (11725396-11725569) | |
| 543-653, gnl|rheMac2|chr9 (11745164-11745337) | |
| 543-653, gnl|rn3|chr17 (83171783-83171956) | |
| 654-767, gnl|bosTau2|chr13 (5518597-5518710) | |
| 654-767, gnl|canFam2|chr2 (27697380-27697264) | |
| 654-767, gnl|canFam2|chr9 (51111212-51111310) | |
| 654-767, gnl|danRer3|chr4 (26989793-26989677) | |
| 654-767, gnl|dasNov1|scaffold_163867 (3721-3831) | |
| 654-767, gnl|echTel1|scaffold_211120 (11045-11161) | |
| 654-767, gnl|fr1|chrUn (103989503-103989384) | |
| 654-767, gnl|fr1|chrUn (103989383-103989498) | |
| 654-767, gnl|galGal2|chr1 (4229643-4229527) | |
| 654-767, gnl|hg17|chr10 (11575118-11575234) | |
| 654-767, gnl|Hg17|chr10 (11575233-11575120) | |
| 654-767, gnl|hg17|chr17 (25908013-25908132) | |
| 654-767, gnl|loxAfr1|scaffold_1611 (100808-100692) | |
| 654-767, gnl|mm7|chr2 (6338172-6338291) | |
| 654-767, gnl|mm7|chr2 (6338293-6338177) | |
| 654-767, gnl|Mm7|chr2 (6338176-6338289) | |
| 654-767, gnl|monDom2|scaffold_30 (10156355-10156471) | |
| 654-767, gnl|oryCun1|scaffold_176922 (43988-44107) | |
| 654-767, gnl|oryCun1|scaffold_198301 (127081-126965) | |
| 654-767, gnl|panTro1|chr19 (20738832-20738733) | |
| 654-767, gnl|panTro1|chr8 (11717453-11717569) | |
| 654-767, gnl|rheMac2|chr1 (210516006-210516125) | |
| 654-767, gnl|rheMac2|chr9 (11733626-11733742) | |
| 654-767, gnl|rn3|chr17 (83165808-83165689) | |
| 654-767, gnl|rn3|chr17 (83165687-83165803) | |
| 654-767, gnl|tetNig1|chrUn_random (29955312-29955431) | |
| 654-767, gnl|tetNig1|chrUn_random (29955432-29955317) | |
| 654-767, gnl|xenTro1|scaffold_314 (233460-233344) | |
| 812-934, gnl|bosTau2|chr13 (5522652-5522774) | |
| 812-934, gnl|canFam2|chr2 (27701479-27701311) | |
| 812-934, gnl|danRer3|chr4 (26993204-26993052) | |
| 812-934, gnl|dasNov1|scaffold_9339 (44503-44672) | |
| 812-934, gnl|fr1|chrUn (103987926-103988074) | |
| 812-934, gnl|galGal2|chr1 (4233809-4233659) | |
| 812-934, gnl|hg17|chr10 (11571085-11571254) | |
| 812-934, gnl|Hg17|chr10 (11571228-11571106) | |
| 812-934, gnl|loxAfr1|scaffold_19882 (8688-8854) | |
| 812-934, gnl|mm7|chr2 (6341689-6341529) | |
| 812-934, gnl|Mm7|chr2 (6341544-6341666) | |
| 812-934, gnl|monDom2|scaffold_30 (10153709-10153880) | |
| 812-934, gnl|oryCun1|scaffold_198301 (131123-130959) | |
| 812-934, gnl|panTro1|chr8 (11713428-11713597) | |
| 812-934, gnl|rheMac2|chr9 (11729624-11729793) | |
| 812-934, gnl|rn3|chr17 (83162501-83162668) | |
| 812-934, gnl|tetNig1|chrUn_random (29955768-29955628) | |
| 812-934, gnl|xenTro1|scaffold_314 (236698-236525) |