Ss1.1-Pig4-TMW8025H19.3
|
GCGGCTCGAGGACTGATGCAGCTCAATTCCCTCTATGTACCCAGAACTATTCTGATGGCT
CTTTGTTCCTACAGTGGCTAAAGTCCAGTAAGTTGAAAACATGAATGGCAAAGAACATTA
GAGTCAAGTAGAACCTATGATGGTAAGAAAGTTCATGAGCACTAAAACAATGGCAAACAA
CACAATTTCACTTGAAAAGGTTTATATAAAACAAGATGGAGGAAGGCACTGCTTGAACAT
AATGTCTCTAATCTCTTGATATTAACAAAATCAGACTCCTTAGATGTCTACTTGCATAGG
CTCTCAGCTCTCCCAAGTGTTTTCCTTCTACAATGTCAGATTTCCTATTGTCTTCCCTAA
TAATCTAGTGTGATGTACCTTTTTATTAATTCAAGTAGACCATCTCTCTGCAATGAATCG
AACACTTGTCGAACAAGTACTTAATTGTGTCATGGATCTATGTGCTCATATAAAAAAGCA
TTGTACAACTGCTGTGCTTCAGTCTATGTGAGTGCTCAGAAATACAGTGGCTAAATAAAA
TTTTGGAGAAAATAACTTCAAAAGCTCCAATTATACTTATTATACTATATGTCCTACCTA
TTCTTTTTTTTTCCTGCCATACCTGTAGCAGGTGGAAGTTCCCAGGTCATGAACTGAACC
TGCACCCCAGCAGTGACCTGAGCCTCTACAGTGAGAATGCCAGATCTTTAATCTACTGCT
CCACGAGAGAACTCCTGTTATACCTATTATGTACCCTTATATTCCTGACTCAGAGTTAGT
TTTTGAAAGCCCCGAATGGATGGGGTAGCATAACATTAAAGAGTATGGAAATCCATGGGA
AAATCTGAAGTGAACAACAAATGGTATGGATCTGCTGTCGTGGGAATGAGTGGCTTTTGA
ATACAAAGATAGAAATGGATCACGAATTATCTCTTTTTTTAGTCCATGTTTTGATCAGGT
TTTAATTATAACAACCCCCGCCCAACACACACACATTCACAGGAAAGGATGATATAATTC
AAGACAAGATTTGCCATATGCAGAATTAACAGACATTACAGGAACAATGTAAAGATGGGC
AGGTAAAACTAAAGAATCTTAACCGATATTGAGAAGTAGCAAAATTTAAATTCTGTATCA
AAGTGGACTTTAGTAATATAGTAAAAAAAAACCAGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGCTCGAGGACTGATGCAGCTCAATTCCCTCTATGTACCCAGAACTATTCTGATGGCT
CTTTGTTCCTACAGTGGCTAAAGTCCAGTAAGTTGAAAACATGAATGGCAAAGAACATTA
GAGTCAAGTAGAACCTATGATGGTAAGAAAGTTCATGAGCACTAAAACAATGGCAAACAA
CACAATTTCACTTGAAAAGGTTTATATAAAACAAGATGGAGGAAGGCACTGCTTGAACAT
AATGTCTCTAATCTCTTGATATTAACAAAATCAGACTCCTTAGATGTCTACTTGCATAGG
CTCTCAGCTCTCCCAAGTGTTTTCCTTCTACAATGTCAGATTTCCTATTGTCTTCCCTAA
TAATCTAGTGTGATGTACCTTTTTATTAATTCAAGTAGACCATCTCTCTGCAATGAATCG
AACACTTGTCGAACAAGTACTTAATTGTGTCATGGATCTATGTGCTCATATAAAAAAGCA
TTGTACAACTGCTGTGCTTCAGTCTATGTGAGTGCTCAGAAATACAGTGGCTAAATAAAA
TTTTGGAGAAAATAACTTCAAAAGCTCCAATTATACTTATTATACTATATGTCCTACCTA
TTCTTTTTTTTTCCTGCCATACCTGTAGCAGGTGGAAGTTCCCAGGTCATGAACTGAACC
TGCACCCCAGCAGTGACCTGAGCCTCTACAGTGAGAATGCCAGATCTTTAATCTACTGCT
CCACGAGAGAACTCCTGTTATACCTATTATGTACCCTTATATTCCTGACTCAGAGTTAGT
TTTTGAAAGCCCCGAATGGATGGGGTAGCATAACATTAAAGAGTATGGAAATCCATGGGA
AAATCTGAAGTGAACAACAAATGGTATGGATCTGCTGTCGTGGGAATGAGTGGCTTTTGA
ATACAAAGATAGAAATGGATCACGAATTATCTCTTTTTTTAGTCCATGTTTTGATCAGGT
TTTAATTATAACAACCCCCGCCCAACACACACACATTCACAGGAAAGGATGATATAATTC
AAGACAAGATTTGCCATATGCAGAATTAACAGACATTACAGGAACAATGTAAAGATGGGC
AGGTAAAACTAAAGAATCTTAACCGATATTGAGAAGTAGCAAAATTTAAATTCTGTATCA
AAGTGGACTTTAGTAATATAGTAAAAAAAAACCAGC
|
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30-229, gnl|bosTau2|chr7 (59921753-59921560) |
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30-229, gnl|canFam2|chr3 (15561431-15561100) |
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30-229, gnl|dasNov1|scaffold_6815 (102911-103236) |
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30-229, gnl|echTel1|scaffold_314588 (48723-49048) |
|
30-229, gnl|hg17|chr5 (96392606-96392935) |
|
30-229, gnl|loxAfr1|scaffold_62441 (1153-808) |
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30-229, gnl|mm7|chr17 (15698353-15698053) |
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30-229, gnl|monDom2|scaffold_93 (280097-280475) |
|
30-229, gnl|oryCun1|scaffold_204265 (2149-1834) |
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30-229, gnl|panTro1|chr4 (102157123-102157452) |
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30-229, gnl|rheMac2|chr6 (93242281-93242612) |
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30-229, gnl|rn3|chr1 (56063883-56063567) |
| |
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258-606, gnl|bosTau2|chr7 (59921490-59921151) |
|
258-606, gnl|Hg17|chr5 (96392738-96392408) |
|
258-606, gnl|Mm7|chr17 (15698225-15698554) |
| |
|
741-1171, gnl|bosTau2|chr7 (59921162-59920713) |
|
741-1171, gnl|Hg17|chr5 (96392419-96391893) |
|
741-1171, gnl|Mm7|chr17 (15698545-15699000) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
30-229, gnl|bosTau2|chr7 (59921753-59921560) |
|
30-229, gnl|canFam2|chr3 (15561431-15561100) |
|
30-229, gnl|dasNov1|scaffold_6815 (102911-103236) |
|
30-229, gnl|echTel1|scaffold_314588 (48723-49048) |
|
30-229, gnl|hg17|chr5 (96392606-96392935) |
|
30-229, gnl|loxAfr1|scaffold_62441 (1153-808) |
|
30-229, gnl|mm7|chr17 (15698353-15698053) |
|
30-229, gnl|monDom2|scaffold_93 (280097-280475) |
|
30-229, gnl|oryCun1|scaffold_204265 (2149-1834) |
|
30-229, gnl|panTro1|chr4 (102157123-102157452) |
|
30-229, gnl|rheMac2|chr6 (93242281-93242612) |
|
30-229, gnl|rn3|chr1 (56063883-56063567) |
| |
|
258-606, gnl|bosTau2|chr7 (59921490-59921151) |
|
258-606, gnl|Hg17|chr5 (96392738-96392408) |
|
258-606, gnl|Mm7|chr17 (15698225-15698554) |
| |
|
741-1171, gnl|bosTau2|chr7 (59921162-59920713) |
|
741-1171, gnl|Hg17|chr5 (96392419-96391893) |
|
741-1171, gnl|Mm7|chr17 (15698545-15699000) |
