Ss1.1-Pig4-TMW8026M23.5
|
GCGGAAGTGTGCGCCCAGGTTTCGGCCGCTGACCAGCCAGCAACATGGTGGCACCCGTAC
TGGAGACCTCTCACGTGTTTTGCTGCCCGAATCGGGTGCGGGGAGCTCTCAGCTGGAGCT
CCGGGCCCGGAGGACTTCTTGCCTTTGGCACGTCCTGTTCCGTAGTGCTCTATGACCCTC
AGAAAAGGGTTGTTATTACCAACCTGAATGGTCACACTGCTCGAGTCAATTGCTTACAGT
GGATTTGTAAACAGAATGGATCTCCTTCTACTGAATTAGTTTCTGGAGGATCTGATAATC
AAGTGATTCACTGGGAAATAGAGAATAATCAGCTTTTAAAAGCAGTCCACCTCCCAGGCC
ATGAAGGACCTATTTATGCGGTGCATGCTGTTTACCAGAAGAGGGCGTCGGATACTGCTT
TCCGTACACTGATAGTGTCCGCAGCTTCTGATTCTACTGTCCGAGTCTGGTCTAAACAGG
GTTTTGAAGTGACATGCCTTCAGACCTTGAACTTTGGAAATGGATTCACTCTGGCTCTCT
GCTTATCTTTTTTGCCTGATACCGATGTACCAATATTAGCATGTGGCGATGATGACTGCA
AAATTCACTTATTCGTTCAACAAAATGATCAGGTAATTAATGATGTTTATTAAGAGGCTA
GAATTACATTCTGCTTAATTACATATCTTAATACAGATTATATTTTCAGATTATAGAATT
TGAGGGATAGTCTAAACTAAAATAATCCAGTAGCAGAATCTTTTCAACAGTCCTGTGTTA
AATGGTTTTTCACTCTTTATTTGAATAGCAGGTAGTTATTGCTTTGGCCACCAGGTCCAG
AGTTGTTGGGGGAAACAGGTCATTAGGTGGGGAAGGAGAGAAAAGATGCTTTTAAAAATT
TAAAAGAAGTCTAGCATACCCACGGTGAAATACTTCCCAGTAGTAGTTAATTTGTCCTTT
CGAGCTTTACCTATTCTTTGAGTGGTTAAATTAAAGGAAAGTTTCAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGAAGTGTGCGCCCAGGTTTCGGCCGCTGACCAGCCAGCAACATGGTGGCACCCGTAC
TGGAGACCTCTCACGTGTTTTGCTGCCCGAATCGGGTGCGGGGAGCTCTCAGCTGGAGCT
CCGGGCCCGGAGGACTTCTTGCCTTTGGCACGTCCTGTTCCGTAGTGCTCTATGACCCTC
AGAAAAGGGTTGTTATTACCAACCTGAATGGTCACACTGCTCGAGTCAATTGCTTACAGT
GGATTTGTAAACAGAATGGATCTCCTTCTACTGAATTAGTTTCTGGAGGATCTGATAATC
AAGTGATTCACTGGGAAATAGAGAATAATCAGCTTTTAAAAGCAGTCCACCTCCCAGGCC
ATGAAGGACCTATTTATGCGGTGCATGCTGTTTACCAGAAGAGGGCGTCGGATACTGCTT
TCCGTACACTGATAGTGTCCGCAGCTTCTGATTCTACTGTCCGAGTCTGGTCTAAACAGG
GTTTTGAAGTGACATGCCTTCAGACCTTGAACTTTGGAAATGGATTCACTCTGGCTCTCT
GCTTATCTTTTTTGCCTGATACCGATGTACCAATATTAGCATGTGGCGATGATGACTGCA
AAATTCACTTATTCGTTCAACAAAATGATCAGGTAATTAATGATGTTTATTAAGAGGCTA
GAATTACATTCTGCTTAATTACATATCTTAATACAGATTATATTTTCAGATTATAGAATT
TGAGGGATAGTCTAAACTAAAATAATCCAGTAGCAGAATCTTTTCAACAGTCCTGTGTTA
AATGGTTTTTCACTCTTTATTTGAATAGCAGGTAGTTATTGCTTTGGCCACCAGGTCCAG
AGTTGTTGGGGGAAACAGGTCATTAGGTGGGGAAGGAGAGAAAAGATGCTTTTAAAAATT
TAAAAGAAGTCTAGCATACCCACGGTGAAATACTTCCCAGTAGTAGTTAATTTGTCCTTT
CGAGCTTTACCTATTCTTTGAGTGGTTAAATTAAAGGAAAGTTTCAAA
|
|
gi|26336713|dbj|BAC32039.1| |
Protein identifier
|
gi|26336713|dbj|BAC32039.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-182, gnl|bosTau2|chr24 (16272220-16272039) |
|
1-182, gnl|Hg17|chr18 (31963850-31964032) |
|
1-182, gnl|Mm7|chr18 (24988608-24988789) |
| |
|
329-489, gnl|bosTau2|chr24 (16257615-16257455) |
|
329-489, gnl|canFam2|chr7 (57029010-57028847) |
|
329-489, gnl|dasNov1|scaffold_14551 (65546-65711) |
|
329-489, gnl|echTel1|scaffold_217259 (1431-1603) |
|
329-489, gnl|hg17|chr18 (31972204-31972369) |
|
329-489, gnl|Hg17|chr18 (31972227-31972387) |
|
329-489, gnl|loxAfr1|scaffold_58663 (7446-7281) |
|
329-489, gnl|mm7|chr18 (24996546-24996708) |
|
329-489, gnl|Mm7|chr18 (24996566-24996726) |
|
329-489, gnl|monDom2|scaffold_4 (11212824-11212672) |
|
329-489, gnl|oryCun1|scaffold_204200 (50345-50180) |
|
329-489, gnl|panTro1|chr17 (27944498-27944663) |
|
329-489, gnl|rheMac2|chr18 (29087424-29087589) |
|
329-489, gnl|rn3|chr18 (16410461-16410623) |
|
329-489, gnl|tetNig1|chr21 (904051-904193) |
| |
|
567-1006, gnl|bosTau2|chr24 (16255570-16255113) |
|
567-1006, gnl|Hg17|chr18 (31975097-31975550) |
|
567-1006, gnl|Mm7|chr18 (24999072-24999683) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-182, gnl|bosTau2|chr24 (16272220-16272039) |
|
1-182, gnl|Hg17|chr18 (31963850-31964032) |
|
1-182, gnl|Mm7|chr18 (24988608-24988789) |
| |
|
329-489, gnl|bosTau2|chr24 (16257615-16257455) |
|
329-489, gnl|canFam2|chr7 (57029010-57028847) |
|
329-489, gnl|dasNov1|scaffold_14551 (65546-65711) |
|
329-489, gnl|echTel1|scaffold_217259 (1431-1603) |
|
329-489, gnl|hg17|chr18 (31972204-31972369) |
|
329-489, gnl|Hg17|chr18 (31972227-31972387) |
|
329-489, gnl|loxAfr1|scaffold_58663 (7446-7281) |
|
329-489, gnl|mm7|chr18 (24996546-24996708) |
|
329-489, gnl|Mm7|chr18 (24996566-24996726) |
|
329-489, gnl|monDom2|scaffold_4 (11212824-11212672) |
|
329-489, gnl|oryCun1|scaffold_204200 (50345-50180) |
|
329-489, gnl|panTro1|chr17 (27944498-27944663) |
|
329-489, gnl|rheMac2|chr18 (29087424-29087589) |
|
329-489, gnl|rn3|chr18 (16410461-16410623) |
|
329-489, gnl|tetNig1|chr21 (904051-904193) |
| |
|
567-1006, gnl|bosTau2|chr24 (16255570-16255113) |
|
567-1006, gnl|Hg17|chr18 (31975097-31975550) |
|
567-1006, gnl|Mm7|chr18 (24999072-24999683) |
