Non-Coding RNA Search

Ss1.1-Pig4-TMW8027J10.5

Sequence:


               
               TTTTGCCCCAAATAAAACTTAACTCTCAAAAATAAATAAATAAATAAATAAATAAAAAGC
ATATAACTAGGCATAGAATAACTGACTTTTGAGAGAGAAGACCTAAAGAGTATATTAATC
AACCACTTCTAATTTATTTAAAATCTGTTCTTGTCTTAAATTAGATCAACAGAATACAAT
GTTCCTGAAAAATATTTTTAAAATCCCCCGCAGAAGTGCTTTCACAAAGTTATAACTGAA
CGTTGAACTCAGCTTTATTAAGGCAATCTGAAGAATATTTTCTTAATCTTTGGCAAAGTT
ACAGTTCAGGATGTTGGCTTTTATGTTACTTACTGCTCCTTTTATAAAGAGCCACTTAAC
GGGTTTCTAAGAGAATTGACGCCAGGAAAGGGCATCAATTACTTTTCATTGAGCTCGTAT
CAAACAGTACACATTTTGGAACACACCTTATTTTCCTTACTGCCTTGTCTGCCAGGTTTA
GAGCTAAATTTAGTGATCAGTTAATGTAAAGATCTAGCTCTTGGTACAATGAGTTCTATC
CTTTTAAGTGAAATGAACTACTCATTTTTATAATTTTTAATTCTTCTGTCTTTAAATAGG
CAAGTCACCTCAAATTGTGTTTCTAAATAGACATTCAAGGAGAGCCATGTCCAGATGCTA
TATAATAAATAAATATGAGAAACTGGAAATAACTACTCTTCTGCTGTTTTATACATACGT
AATGTTAAAGTTTTAAAATAGTTGCCCTTTTTAATAATCAGTGTTTTCCTAACGTGTTTA
GCCTTTTACATGGATAGTGAATACATTTATTTTATCTCAGCCTTCTTAAACTGCAGTGGT
TTTAAATATAATCTTTACTAAAACTTCAGAATTCTATTCGTAAACTTCTGGTCAAAACAT
TAGCTTTTCAGACAACATATTGTTATGGAGAGTTTAAACTGATGAAATGCATTTTCCTAT
CATAGAAGGAATTATTGAGAGAACATCTGAAATTTTCAACTACTCAGTTGCAGTTCCAGC
TTTTTAAAAAAAATCAATACTCATTCTTTCTGTATTACTTTTCTGAGAAGACCTTAACCT
TAAGAACACTAATTTGAGATGAAGTTTTGTATTTGCCTAATGACTAGGGGCTGAAGTGTT
TAAATGACCTTTTTTATCCTCAGGGGGTGATTGCTTTGGGGCAGGTTTGAGGTCATTGGC
TGAAGAGTTACGAAAAATGTCATAATTTTGGCTGAAGGTGTAGTAAACTTGGACTACAGA
CAAAGCTGAGGCTTCCTCTGGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTGCCCCAAATAAAACTTAACTCTCAAAAATAAATAAATAAATAAATAAATAAAAAGC
ATATAACTAGGCATAGAATAACTGACTTTTGAGAGAGAAGACCTAAAGAGTATATTAATC
AACCACTTCTAATTTATTTAAAATCTGTTCTTGTCTTAAATTAGATCAACAGAATACAAT
GTTCCTGAAAAATATTTTTAAAATCCCCCGCAGAAGTGCTTTCACAAAGTTATAACTGAA
CGTTGAACTCAGCTTTATTAAGGCAATCTGAAGAATATTTTCTTAATCTTTGGCAAAGTT
ACAGTTCAGGATGTTGGCTTTTATGTTACTTACTGCTCCTTTTATAAAGAGCCACTTAAC
GGGTTTCTAAGAGAATTGACGCCAGGAAAGGGCATCAATTACTTTTCATTGAGCTCGTAT
CAAACAGTACACATTTTGGAACACACCTTATTTTCCTTACTGCCTTGTCTGCCAGGTTTA
GAGCTAAATTTAGTGATCAGTTAATGTAAAGATCTAGCTCTTGGTACAATGAGTTCTATC
CTTTTAAGTGAAATGAACTACTCATTTTTATAATTTTTAATTCTTCTGTCTTTAAATAGG
CAAGTCACCTCAAATTGTGTTTCTAAATAGACATTCAAGGAGAGCCATGTCCAGATGCTA
TATAATAAATAAATATGAGAAACTGGAAATAACTACTCTTCTGCTGTTTTATACATACGT
AATGTTAAAGTTTTAAAATAGTTGCCCTTTTTAATAATCAGTGTTTTCCTAACGTGTTTA
GCCTTTTACATGGATAGTGAATACATTTATTTTATCTCAGCCTTCTTAAACTGCAGTGGT
TTTAAATATAATCTTTACTAAAACTTCAGAATTCTATTCGTAAACTTCTGGTCAAAACAT
TAGCTTTTCAGACAACATATTGTTATGGAGAGTTTAAACTGATGAAATGCATTTTCCTAT
CATAGAAGGAATTATTGAGAGAACATCTGAAATTTTCAACTACTCAGTTGCAGTTCCAGC
TTTTTAAAAAAAATCAATACTCATTCTTTCTGTATTACTTTTCTGAGAAGACCTTAACCT
TAAGAACACTAATTTGAGATGAAGTTTTGTATTTGCCTAATGACTAGGGGCTGAAGTGTT
TAAATGACCTTTTTTATCCTCAGGGGGTGATTGCTTTGGGGCAGGTTTGAGGTCATTGGC
TGAAGAGTTACGAAAAATGTCATAATTTTGGCTGAAGGTGTAGTAAACTTGGACTACAGA
CAAAGCTGAGGCTTCCTCTGGAAA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               47-284, gnl|bosTau2|chr17 (20185898-20185655)
               

               
               47-284, gnl|Hg17|chr4 (124088204-124088440)
               


               
               336-846, gnl|bosTau2|chr17 (20182643-20182142)
               

               
               336-846, gnl|Hg17|chr4 (124088580-124089283)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-284, gnl|bosTau2|chr17 (20185898-20185655)
               

               
               47-284, gnl|Hg17|chr4 (124088204-124088440)
               


               
               336-846, gnl|bosTau2|chr17 (20182643-20182142)
               

               
               336-846, gnl|Hg17|chr4 (124088580-124089283)

	47-284, gnl\|bosTau2\|chr17 (20185898-20185655)
	47-284, gnl\|Hg17\|chr4 (124088204-124088440)

	336-846, gnl\|bosTau2\|chr17 (20182643-20182142)
	336-846, gnl\|Hg17\|chr4 (124088580-124089283)